Variant report

Variant	rs192931009
Chromosome Location	chr3:156093770-156093771
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:156090883..156092603-chr3:156093278..156096049,2	K562	blood:
2	chr3:156089108..156092383-chr3:156093518..156096511,3	K562	blood:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014755	chr3:155889430-156411894	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
2	esv3461206	chr3:156090258-156095656	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3505414	chr3:156091008-156094806	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3461203	chr3:156091283-156094631	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3505421	chr3:156091433-156094681	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3461202	chr3:156091732-156093982	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv2620873	chr3:156091782-156094476	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3505416	chr3:156091854-156094380	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv513090	chr3:156091900-156093949	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv2289616	chr3:156092028-156093793	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3461209	chr3:156092033-156093799	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3505420	chr3:156092059-156093830	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3505418	chr3:156092072-156093816	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3505415	chr3:156092073-156093789	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv3461205	chr3:156092080-156093811	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv3505417	chr3:156092106-156093783	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv1809974	chr3:156092164-156095513	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
18	esv1812747	chr3:156092164-156096606	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv1809143	chr3:156092164-156098920	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
20	nsv592115	chr3:156092548-156097836	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:156088600-156096000	Weak transcription	Placenta	Placenta
2	chr3:156090800-156094000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr3:156090800-156100600	Weak transcription	Fetal Muscle Leg	muscle
4	chr3:156091800-156095000	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr3:156092400-156101600	Weak transcription	Aorta	Aorta

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links