Variant report

Variant	rs193038959
Chromosome Location	chr1:172913563-172913564
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831904	chr1:172912110-173070429	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172903600-172914200	Weak transcription	Aorta	Aorta
2	chr1:172905600-172916000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:172910800-172914200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr1:172910800-172916200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr1:172911000-172914400	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr1:172911200-172914200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr1:172911200-172914400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr1:172911200-172915800	Weak transcription	NHDF-Ad	bronchial
9	chr1:172911200-172916000	Weak transcription	HSMMtube	muscle
10	chr1:172911200-172916200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr1:172911200-172917000	Weak transcription	Fetal Stomach	stomach
12	chr1:172911200-172917600	Weak transcription	Fetal Lung	lung
13	chr1:172911400-172916000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr1:172911400-172916000	Weak transcription	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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