The 2.0 version of rSNPBase

Variant report

Variant rs193063741
Chromosome Location chr5:60732848-60732849
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60711000-60735800 Weak transcription Monocytes-CD14+_RO01746 blood
2 chr5:60719800-60745200 Weak transcription NHDF-Ad bronchial
3 chr5:60720000-60733800 Weak transcription NHLF lung
4 chr5:60720000-60736400 Weak transcription Primary hematopoietic stem cells blood
5 chr5:60720000-60737400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr5:60720400-60734000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr5:60720600-60743200 Weak transcription HSMMtube muscle
8 chr5:60721000-60733000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr5:60725600-60737400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr5:60726000-60733800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr5:60726000-60736600 Weak transcription Right Atrium heart
12 chr5:60726800-60745600 Weak transcription Stomach Mucosa stomach
13 chr5:60728400-60733400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr5:60728400-60733600 Weak transcription Fetal Brain Male brain
15 chr5:60728400-60734000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr5:60728400-60734000 Weak transcription HSMM muscle
17 chr5:60728400-60737200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr5:60728400-60745400 Weak transcription Ovary ovary
19 chr5:60728600-60734000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr5:60728600-60734000 Weak transcription Brain Germinal Matrix brain
21 chr5:60728600-60737400 Weak transcription Fetal Lung lung
22 chr5:60728600-60737400 Weak transcription Fetal Stomach stomach
23 chr5:60728800-60733800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr5:60728800-60737600 Weak transcription Colon Smooth Muscle Colon
25 chr5:60729000-60737000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr5:60729600-60733000 Weak transcription Gastric stomach
27 chr5:60730200-60737600 Enhancers Brain Inferior Temporal Lobe brain
28 chr5:60730400-60733000 Enhancers Brain Angular Gyrus brain
29 chr5:60730400-60733200 Enhancers Brain Cingulate Gyrus brain
30 chr5:60730400-60735800 Enhancers Brain Substantia Nigra brain
31 chr5:60731200-60737000 Enhancers Brain Anterior Caudate brain
32 chr5:60731400-60734400 Weak transcription A549 lung
33 chr5:60731600-60736600 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr5:60732000-60734800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr5:60732000-60737800 Enhancers Brain Hippocampus Middle brain
36 chr5:60732200-60733200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr5:60732200-60733200 Weak transcription Hela-S3 cervix
38 chr5:60732200-60733400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr5:60732400-60736000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr5:60732400-60737200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr5:60732600-60733000 Enhancers Fetal Heart heart
42 chr5:60732600-60733400 Enhancers Lung lung
43 chr5:60732600-60733600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr5:60732600-60733800 Enhancers Breast Myoepithelial Primary Cells Breast
45 chr5:60732600-60734600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr5:60732600-60736200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr5:60732600-60743000 Weak transcription Aorta Aorta
48 chr5:60732800-60733000 Enhancers Muscle Satellite Cultured Cells --
49 chr5:60732800-60733000 Enhancers Psoas Muscle Psoas
50 chr5:60732800-60733000 Enhancers Small Intestine intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015