Variant report

Variant	rs193141608
Chromosome Location	chr16:64944577-64944578
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948640	chr16:64859061-65112790	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv984501	chr16:64919797-64993897	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
3	nsv974823	chr16:64943759-64945594	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64943200-64944800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr16:64943400-64944800	Enhancers	Ovary	ovary
3	chr16:64943600-64944600	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr16:64943800-64944600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr16:64943800-64944600	Enhancers	Fetal Muscle Leg	muscle
6	chr16:64943800-64944600	Enhancers	NH-A	brain
7	chr16:64943800-64944800	Enhancers	NHDF-Ad	bronchial
8	chr16:64943800-64945000	Enhancers	Fetal Lung	lung
9	chr16:64943800-64945000	Enhancers	HSMMtube	muscle
10	chr16:64944000-64944600	Enhancers	Adipose Nuclei	Adipose
11	chr16:64944000-64944800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
12	chr16:64944000-64944800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr16:64944000-64944800	Enhancers	NHLF	lung
14	chr16:64944000-64945000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr16:64944200-64944600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr16:64944200-64944600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr16:64944200-64944600	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr16:64944200-64944800	Enhancers	HUES6 Cell Line	embryonic stem cell
19	chr16:64944200-64944800	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr16:64944200-64944800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr16:64944200-64944800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
22	chr16:64944200-64944800	Enhancers	Fetal Stomach	stomach
23	chr16:64944200-64944800	Enhancers	Stomach Smooth Muscle	stomach
24	chr16:64944200-64945000	Enhancers	Fetal Brain Male	brain
25	chr16:64944400-64944600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr16:64944400-64944600	Enhancers	Fetal Muscle Trunk	muscle
27	chr16:64944400-64944800	Active TSS	Brain Inferior Temporal Lobe	brain
28	chr16:64944400-64945000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr16:64944400-64945200	Enhancers	Osteobl	bone

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