Variant report

Variant	rs1931650
Chromosome Location	chr6:82482866-82482867
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:82464889..82466747-chr6:82480958..82483364,2	K562	blood:
2	chr6:82481035..82483542-chr6:82485659..82488482,2	MCF-7	breast:
3	chr6:82474728..82479449-chr6:82479643..82485217,7	MCF-7	breast:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs13214556	1.00[YRI][hapmap]
rs16893454	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16893471	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16893491	1.00[YRI][hapmap]
rs58660080	0.85[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs61465428	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82474200-82485800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:82477400-82483600	Enhancers	Monocytes-CD14+_RO01746	blood
3	chr6:82477600-82483200	Enhancers	Hela-S3	cervix
4	chr6:82477600-82485400	Weak transcription	Placenta	Placenta
5	chr6:82479600-82483000	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr6:82480400-82485800	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr6:82481600-82483000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr6:82481600-82483200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:82481600-82483200	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr6:82481600-82483200	Enhancers	HMEC	breast
11	chr6:82481600-82484000	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr6:82481800-82483000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr6:82481800-82483200	Enhancers	NHDF-Ad	bronchial
14	chr6:82481800-82483400	Weak transcription	HepG2	liver
15	chr6:82482000-82483000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr6:82482000-82483000	Enhancers	Osteobl	bone
17	chr6:82482000-82483200	Enhancers	Primary hematopoietic stem cells	blood
18	chr6:82482000-82483200	Enhancers	NHEK	skin
19	chr6:82482000-82484600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr6:82482200-82483400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr6:82482400-82483000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr6:82482600-82483200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr6:82482800-82483000	Enhancers	Stomach Mucosa	stomach
24	chr6:82482800-82484200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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