The 2.0 version of rSNPBase

Variant report

Variant rs193250202
Chromosome Location chr6:37361350-37361351
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37324000-37366800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr6:37328000-37361800 Strong transcription Dnd41 blood
3 chr6:37334400-37363200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr6:37337400-37362600 Weak transcription Psoas Muscle Psoas
5 chr6:37337600-37363200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr6:37337600-37363200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr6:37339800-37361400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:37342400-37362000 Strong transcription Adipose Nuclei Adipose
9 chr6:37343000-37363600 Strong transcription Fetal Stomach stomach
10 chr6:37343000-37365000 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr6:37344000-37361800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr6:37345600-37363400 Weak transcription HUVEC blood vessel
13 chr6:37346000-37362400 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr6:37347600-37363000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr6:37349800-37363800 Weak transcription Colon Smooth Muscle Colon
16 chr6:37350000-37368600 Weak transcription Fetal Heart heart
17 chr6:37352600-37363400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr6:37353800-37361800 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr6:37353800-37362000 Strong transcription HUES48 Cell Line embryonic stem cell
20 chr6:37353800-37362000 Strong transcription Primary B cells from cord blood blood
21 chr6:37353800-37363400 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr6:37353800-37363800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr6:37354000-37361600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr6:37354000-37361600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr6:37354000-37361600 Strong transcription HepG2 liver
26 chr6:37354000-37363000 Strong transcription Duodenum Smooth Muscle Duodenum
27 chr6:37354200-37361600 Strong transcription Brain Inferior Temporal Lobe brain
28 chr6:37355600-37361400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr6:37355600-37361600 Strong transcription H1 Cell Line embryonic stem cell
30 chr6:37355600-37362800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr6:37355800-37361600 Strong transcription iPS-20b Cell Line embryonic stem cell
32 chr6:37355800-37361800 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr6:37355800-37361800 Strong transcription Brain Anterior Caudate brain
34 chr6:37356200-37361800 Strong transcription Aorta Aorta
35 chr6:37356200-37367400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr6:37356600-37362000 Strong transcription HMEC breast
37 chr6:37356600-37362800 Weak transcription Right Ventricle heart
38 chr6:37356800-37363800 Strong transcription Brain Cingulate Gyrus brain
39 chr6:37357400-37361600 Strong transcription Stomach Smooth Muscle stomach
40 chr6:37357400-37362200 Strong transcription H9 Cell Line embryonic stem cell
41 chr6:37357600-37364400 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr6:37357800-37361600 Strong transcription Left Ventricle heart
43 chr6:37358000-37362800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr6:37358000-37363400 Strong transcription Lung lung
45 chr6:37358800-37361800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr6:37358800-37362800 Weak transcription Fetal Intestine Small intestine
47 chr6:37358800-37362800 Weak transcription Rectal Smooth Muscle rectum
48 chr6:37358800-37363400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr6:37359000-37361800 Weak transcription NH-A brain
50 chr6:37359000-37362400 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015