Variant report
| Variant | rs1935028 |
|---|---|
| Chromosome Location | chr10:93528408-93528409 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:93525891..93528491-chr10:93557186..93559232,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000107854 | Chromatin interaction |
| ENSG00000228701 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:13)
| rs_ID | r2[population] |
|---|---|
| rs11186707 | 1.00[AMR][1000 genomes] |
| rs11818303 | 0.91[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs12242720 | 1.00[AMR][1000 genomes] |
| rs12245639 | 1.00[AMR][1000 genomes] |
| rs12247755 | 0.89[AFR][1000 genomes] |
| rs12248124 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs12257353 | 0.87[YRI][hapmap];1.00[AMR][1000 genomes] |
| rs7069428 | 1.00[AMR][1000 genomes] |
| rs7084829 | 0.95[YRI][hapmap];1.00[AMR][1000 genomes] |
| rs74151736 | 1.00[AMR][1000 genomes] |
| rs74151737 | 1.00[AMR][1000 genomes] |
| rs7906221 | 1.00[AMR][1000 genomes] |
| rs7908801 | 1.00[AMR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
