The 2.0 version of rSNPBase

Variant report

Variant rs1940921
Chromosome Location chr18:13508226-13508227
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13471000-13537400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr18:13499600-13539200 Weak transcription Gastric stomach
3 chr18:13499800-13514200 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr18:13499800-13531000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr18:13500000-13516800 Weak transcription Duodenum Mucosa Duodenum
6 chr18:13500400-13517400 Weak transcription Spleen Spleen
7 chr18:13501400-13518200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr18:13501600-13525000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr18:13501800-13530600 Weak transcription Rectal Smooth Muscle rectum
10 chr18:13502800-13525200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr18:13503000-13517000 Weak transcription Adipose Nuclei Adipose
12 chr18:13503000-13519200 Weak transcription Pancreas Pancrea
13 chr18:13503200-13511800 Weak transcription Brain Anterior Caudate brain
14 chr18:13503200-13514600 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr18:13503200-13517200 Weak transcription Fetal Lung lung
16 chr18:13503200-13521000 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr18:13503400-13511600 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr18:13503400-13512200 Weak transcription Liver Liver
19 chr18:13503400-13517400 Weak transcription Aorta Aorta
20 chr18:13503800-13512800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr18:13504200-13509000 Weak transcription Left Ventricle heart
22 chr18:13505000-13509000 Weak transcription Right Atrium heart
23 chr18:13505000-13536000 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr18:13505200-13511200 Strong transcription Dnd41 blood
25 chr18:13506000-13515600 Enhancers Skeletal Muscle Female skeletal muscle
26 chr18:13506200-13511600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr18:13506400-13511000 Weak transcription Primary T cells fromperipheralblood blood
28 chr18:13506600-13510800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr18:13506600-13511200 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr18:13506800-13508600 Weak transcription Primary T cells from cord blood blood
31 chr18:13506800-13511600 Weak transcription Primary B cells from peripheral blood blood
32 chr18:13507000-13510600 Weak transcription Fetal Heart heart
33 chr18:13507000-13511200 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr18:13507000-13511200 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr18:13507000-13511800 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr18:13507000-13511800 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr18:13507000-13516200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr18:13507000-13536400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr18:13507600-13509400 Genic enhancers Fetal Thymus thymus
40 chr18:13507600-13509600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr18:13507800-13508400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr18:13508000-13509000 Weak transcription Thymus Thymus
43 chr18:13508200-13508800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr18:13508200-13509400 Enhancers HSMMtube muscle
45 chr18:13508200-13512000 Enhancers Psoas Muscle Psoas

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Last update: Aug 31, 2015