The 2.0 version of rSNPBase

Variant report

Variant rs1941677
Chromosome Location chr18:13110148-13110149
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13018600-13117400 Weak transcription Stomach Mucosa stomach
2 chr18:13086400-13128000 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr18:13089400-13122200 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr18:13091200-13110800 Weak transcription Right Atrium heart
5 chr18:13093000-13111200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr18:13093400-13111200 Strong transcription Fetal Muscle Leg muscle
7 chr18:13097200-13118800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr18:13097600-13111600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr18:13098800-13121200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr18:13099200-13124800 Strong transcription Fetal Thymus thymus
11 chr18:13099200-13127800 Strong transcription Dnd41 blood
12 chr18:13099200-13128200 Strong transcription Primary monocytes fromperipheralblood blood
13 chr18:13099400-13111400 Strong transcription Fetal Intestine Large intestine
14 chr18:13099400-13129400 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr18:13099800-13111000 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr18:13099800-13111000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr18:13099800-13111600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr18:13099800-13112000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr18:13101800-13112400 Weak transcription Fetal Heart heart
20 chr18:13102800-13111600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr18:13103000-13111000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr18:13105400-13115400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr18:13106200-13130000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr18:13106800-13110600 Weak transcription Fetal Intestine Small intestine
25 chr18:13106800-13110600 Weak transcription Pancreas Pancrea
26 chr18:13106800-13110600 Weak transcription NHEK skin
27 chr18:13106800-13113000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr18:13106800-13115200 Weak transcription Gastric stomach
29 chr18:13106800-13115400 Weak transcription Aorta Aorta
30 chr18:13106800-13115600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr18:13106800-13135400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr18:13107000-13110600 Weak transcription HepG2 liver
33 chr18:13107000-13112800 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr18:13107000-13117600 Weak transcription NHLF lung
35 chr18:13107000-13130400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr18:13107200-13110800 Weak transcription Right Ventricle heart
37 chr18:13107200-13114400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr18:13107200-13115200 Weak transcription Fetal Brain Male brain
39 chr18:13107200-13115800 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr18:13107200-13117000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr18:13107200-13117600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr18:13107200-13117600 Weak transcription NHDF-Ad bronchial
43 chr18:13107400-13110600 Weak transcription Fetal Stomach stomach
44 chr18:13107400-13110800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr18:13107400-13115200 Weak transcription H9 Cell Line embryonic stem cell
46 chr18:13107600-13113800 Weak transcription HMEC breast
47 chr18:13107800-13110200 Strong transcription K562 blood
48 chr18:13107800-13112400 Weak transcription HUVEC blood vessel
49 chr18:13107800-13121000 Weak transcription Brain Substantia Nigra brain
50 chr18:13108000-13115200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015