The 2.0 version of rSNPBase

Variant report

Variant rs1947433
Chromosome Location chr2:39227481-39227482
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39200800-39227800 Weak transcription Fetal Heart heart
2 chr2:39202400-39228800 Weak transcription H1 Cell Line embryonic stem cell
3 chr2:39205800-39242600 Weak transcription Psoas Muscle Psoas
4 chr2:39206000-39235800 Weak transcription H9 Cell Line embryonic stem cell
5 chr2:39210000-39232000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:39210400-39233200 Strong transcription Rectal Mucosa Donor 29 rectum
7 chr2:39210400-39241600 Strong transcription Adipose Nuclei Adipose
8 chr2:39210400-39242600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr2:39210600-39229400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr2:39210600-39242400 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr2:39210800-39230200 Strong transcription Dnd41 blood
12 chr2:39211000-39247600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr2:39211200-39228600 Strong transcription HepG2 liver
14 chr2:39211400-39237800 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr2:39211600-39242000 Weak transcription Stomach Mucosa stomach
16 chr2:39211800-39231200 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr2:39211800-39239600 Strong transcription Fetal Intestine Large intestine
18 chr2:39213400-39228000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr2:39213400-39228800 Weak transcription Brain Angular Gyrus brain
20 chr2:39213400-39234400 Weak transcription Gastric stomach
21 chr2:39213400-39234400 Weak transcription NHEK skin
22 chr2:39213400-39242200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr2:39213400-39242600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:39213400-39251200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr2:39213400-39259800 Weak transcription Right Ventricle heart
26 chr2:39213800-39228200 Weak transcription Fetal Intestine Small intestine
27 chr2:39213800-39235000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr2:39213800-39235000 Weak transcription Small Intestine intestine
29 chr2:39213800-39308000 Weak transcription Pancreas Pancrea
30 chr2:39214200-39235400 Weak transcription Hela-S3 cervix
31 chr2:39217400-39229000 Strong transcription Liver Liver
32 chr2:39217400-39241800 Strong transcription Primary T cells fromperipheralblood blood
33 chr2:39217600-39230200 Strong transcription Primary T cells from cord blood blood
34 chr2:39217600-39231200 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr2:39217600-39234200 Strong transcription Primary B cells from peripheral blood blood
36 chr2:39217600-39242400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr2:39217600-39244200 Strong transcription Primary B cells from cord blood blood
38 chr2:39218800-39241200 Strong transcription Primary neutrophils fromperipheralblood blood
39 chr2:39219000-39259200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr2:39219200-39244000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr2:39219400-39228200 Weak transcription Ovary ovary
42 chr2:39219400-39242600 Weak transcription Brain Substantia Nigra brain
43 chr2:39220400-39233000 Strong transcription Duodenum Smooth Muscle Duodenum
44 chr2:39220600-39237000 Strong transcription Fetal Thymus thymus
45 chr2:39221000-39241200 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr2:39221800-39228600 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr2:39223400-39227600 Weak transcription Colon Smooth Muscle Colon
48 chr2:39223400-39230000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr2:39223600-39228200 Weak transcription Fetal Stomach stomach
50 chr2:39223600-39235000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015