Variant report

Variant	rs1954119
Chromosome Location	chr14:69771130-69771131
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10141602	0.89[CHB][hapmap];0.92[ASN][1000 genomes]
rs10146252	0.92[ASN][1000 genomes]
rs1147477	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs35613673	0.91[ASN][1000 genomes]
rs4902713	1.00[CHB][hapmap];0.97[CHD][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes]
rs56107218	0.85[ASN][1000 genomes]
rs745781	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs8017671	1.00[CHB][hapmap];0.97[CHD][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes]
rs8021760	0.92[ASN][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs1954119	ACTN1	cis	lymphoblastoid	seeQTL
rs1954119	ERH	cis	parietal	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69735800-69771600	Weak transcription	Fetal Intestine Small	intestine
2	chr14:69766400-69771200	Weak transcription	Right Ventricle	heart
3	chr14:69770200-69778400	Weak transcription	Left Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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