Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:86325511..86327596-chr9:86327772..86330083,2	K562	blood:
2	chr9:86322177..86324075-chr9:86324629..86327063,2	K562	blood:

Variant related genes	Relation type
ENSG00000254473	Chromatin interaction
ENSG00000135018	Chromatin interaction

rSNPs within LD-proxies of this variant (count:35)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044639	chr9:86252505-86412041	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv893513	chr9:86298632-86433459	Enhancers Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:86324200-86326000	Weak transcription	Primary B cells from cord blood	blood
2	chr9:86324200-86327600	Weak transcription	Brain Cingulate Gyrus	brain
3	chr9:86324200-86327600	Weak transcription	Brain Substantia Nigra	brain
4	chr9:86324200-86327800	Weak transcription	Brain Anterior Caudate	brain
5	chr9:86324200-86327800	Weak transcription	Brain Hippocampus Middle	brain
6	chr9:86324200-86328200	Weak transcription	Fetal Intestine Small	intestine
7	chr9:86324200-86328800	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr9:86324200-86328800	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr9:86324200-86329000	Weak transcription	Fetal Muscle Leg	muscle
10	chr9:86324200-86329200	Weak transcription	Primary neutrophils fromperipheralblood	blood
11	chr9:86324200-86329200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr9:86324200-86330000	Weak transcription	Primary T cells from cord blood	blood
13	chr9:86324200-86330400	Weak transcription	HSMMtube	muscle
14	chr9:86324200-86331000	Weak transcription	Brain Angular Gyrus	brain
15	chr9:86324200-86331800	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr9:86324400-86327600	Weak transcription	Liver	Liver
17	chr9:86324400-86328000	Weak transcription	Fetal Kidney	kidney
18	chr9:86324400-86328400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr9:86324600-86328400	Weak transcription	Pancreas	Pancrea
20	chr9:86324600-86329000	Weak transcription	Skeletal Muscle Female	skeletal muscle

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