Variant report

Variant rs1969269
Chromosome Location chr17:45335537-45335538
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:45332200-45336000 Weak transcription Spleen Spleen
2 chr17:45333200-45344600 Weak transcription Stomach Smooth Muscle stomach
3 chr17:45333600-45336400 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr17:45334000-45335600 Enhancers Duodenum Smooth Muscle Duodenum
5 chr17:45334000-45345800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr17:45334200-45335800 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr17:45334200-45336200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr17:45334400-45335800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr17:45334400-45335800 Enhancers NHLF lung
10 chr17:45334400-45336000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr17:45334400-45336200 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr17:45334400-45336200 Enhancers Colon Smooth Muscle Colon
13 chr17:45334600-45335800 Enhancers HMEC breast
14 chr17:45334600-45335800 Enhancers HSMMtube muscle
15 chr17:45334800-45335800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr17:45334800-45335800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr17:45334800-45335800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr17:45334800-45335800 Flanking Active TSS Muscle Satellite Cultured Cells --
19 chr17:45334800-45335800 Flanking Active TSS NHDF-Ad bronchial
20 chr17:45334800-45335800 Flanking Active TSS Osteobl bone
21 chr17:45334800-45336200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
22 chr17:45335000-45335600 Enhancers Rectal Smooth Muscle rectum
23 chr17:45335000-45335800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr17:45335000-45335800 Enhancers Left Ventricle heart
25 chr17:45335000-45335800 Enhancers GM12878-XiMat blood
26 chr17:45335000-45335800 Flanking Active TSS HSMM muscle
27 chr17:45335000-45335800 Flanking Active TSS HUVEC blood vessel
28 chr17:45335000-45335800 Flanking Active TSS K562 blood
29 chr17:45335200-45335600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
30 chr17:45335200-45335600 Flanking Active TSS Adipose Nuclei Adipose
31 chr17:45335200-45335600 Enhancers Ovary ovary
32 chr17:45335200-45335600 Weak transcription Right Atrium heart
33 chr17:45335200-45335600 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
34 chr17:45335200-45335800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr17:45335200-45335800 Bivalent Enhancer Primary hematopoietic stem cells blood
36 chr17:45335200-45335800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
37 chr17:45335200-45335800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr17:45335200-45335800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
39 chr17:45335200-45335800 Enhancers Aorta Aorta
40 chr17:45335200-45335800 Flanking Active TSS Hela-S3 cervix
41 chr17:45335200-45335800 Bivalent Enhancer NHEK skin
42 chr17:45335200-45336400 Enhancers NH-A brain
43 chr17:45335400-45335600 Bivalent Enhancer H1 Cell Line embryonic stem cell
44 chr17:45335400-45335600 Bivalent Enhancer hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr17:45335400-45335600 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
46 chr17:45335400-45335600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
47 chr17:45335400-45335600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr17:45335400-45335600 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
49 chr17:45335400-45335600 Enhancers Duodenum Mucosa Duodenum
50 chr17:45335400-45335600 Bivalent Enhancer Fetal Muscle Trunk muscle

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