The 2.0 version of rSNPBase

Variant report

Variant rs1970143
Chromosome Location chr1:97700939-97700940
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:97691400-97701000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:97691400-97702600 Weak transcription Fetal Intestine Small intestine
3 chr1:97692800-97703400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:97693000-97701800 Weak transcription Fetal Lung lung
5 chr1:97694800-97701000 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr1:97694800-97712800 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr1:97696000-97701000 Strong transcription Primary monocytes fromperipheralblood blood
8 chr1:97697000-97711000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr1:97697200-97710800 Weak transcription Osteobl bone
10 chr1:97697400-97711400 Weak transcription Brain Anterior Caudate brain
11 chr1:97697800-97704000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:97698000-97708000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr1:97698200-97701000 Weak transcription Right Ventricle heart
14 chr1:97699200-97701000 Weak transcription Gastric stomach
15 chr1:97699200-97702000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:97699200-97702000 Weak transcription Aorta Aorta
17 chr1:97699200-97704000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:97699200-97710800 Weak transcription Rectal Smooth Muscle rectum
19 chr1:97699400-97701000 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:97699400-97701200 Weak transcription Esophagus oesophagus
21 chr1:97699400-97701400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:97699400-97701800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:97699400-97702000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr1:97699400-97706800 Weak transcription Ovary ovary
25 chr1:97699400-97709400 Weak transcription Brain Substantia Nigra brain
26 chr1:97699400-97710800 Weak transcription Stomach Smooth Muscle stomach
27 chr1:97699400-97711000 Weak transcription Fetal Intestine Large intestine
28 chr1:97699400-97723600 Weak transcription Lung lung
29 chr1:97699600-97701200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:97699600-97701600 Weak transcription Primary hematopoietic stem cells blood
31 chr1:97699600-97702600 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr1:97699600-97710000 Weak transcription Brain Cingulate Gyrus brain
33 chr1:97699600-97711000 Weak transcription Brain Inferior Temporal Lobe brain
34 chr1:97699600-97711200 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr1:97699600-97711200 Weak transcription Brain Hippocampus Middle brain
36 chr1:97699600-97729000 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:97699800-97702000 Weak transcription Duodenum Mucosa Duodenum
38 chr1:97699800-97710800 Weak transcription Adipose Nuclei Adipose
39 chr1:97700000-97702200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:97700000-97705600 Weak transcription Liver Liver
41 chr1:97700000-97710600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:97700000-97711400 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr1:97700000-97717800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:97700200-97701800 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:97700200-97702800 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr1:97700400-97702200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr1:97700600-97702200 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr1:97700600-97702200 Weak transcription HSMM muscle
49 chr1:97700600-97703400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr1:97700600-97706600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015