The 2.0 version of rSNPBase

Variant report

Variant rs197502
Chromosome Location chr6:143105281-143105282
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143081800-143105600 Weak transcription Small Intestine intestine
2 chr6:143094800-143109000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr6:143095800-143117600 Weak transcription Fetal Lung lung
4 chr6:143095800-143122200 Weak transcription NHEK skin
5 chr6:143096000-143105600 Weak transcription Duodenum Mucosa Duodenum
6 chr6:143096000-143107200 Weak transcription Brain Substantia Nigra brain
7 chr6:143096000-143108000 Weak transcription Brain Hippocampus Middle brain
8 chr6:143096000-143108400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr6:143096000-143111200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr6:143096000-143117800 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr6:143096000-143122000 Weak transcription Fetal Intestine Small intestine
12 chr6:143096200-143107600 Weak transcription Left Ventricle heart
13 chr6:143096200-143107800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:143096200-143108000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr6:143096200-143108000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:143096200-143120800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr6:143096200-143140800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr6:143100400-143105600 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr6:143101400-143105800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr6:143102800-143107400 Weak transcription NH-A brain
21 chr6:143103000-143107400 Weak transcription Muscle Satellite Cultured Cells --
22 chr6:143103200-143105400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr6:143103200-143107800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr6:143103200-143107800 Weak transcription Brain Anterior Caudate brain
25 chr6:143103400-143107000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr6:143103600-143105400 Weak transcription Aorta Aorta
27 chr6:143103600-143106600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr6:143103600-143117600 Weak transcription Primary T cells fromperipheralblood blood
29 chr6:143103600-143124800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr6:143103800-143105400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr6:143103800-143105800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr6:143103800-143106600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr6:143103800-143107800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr6:143103800-143125400 Weak transcription Fetal Thymus thymus
35 chr6:143104600-143105800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:143104600-143105800 Enhancers NHDF-Ad bronchial
37 chr6:143104600-143107000 Enhancers Primary T cells from cord blood blood
38 chr6:143104600-143107000 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr6:143104600-143107200 Enhancers Primary T helper cells fromperipheralblood blood
40 chr6:143104600-143113200 Enhancers Primary T helper cells PMA-I stimulated --
41 chr6:143104800-143105800 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr6:143104800-143105800 Enhancers Primary T helper naive cells from peripheral blood blood
43 chr6:143104800-143106000 Enhancers Primary B cells from cord blood blood
44 chr6:143104800-143106000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr6:143105000-143105400 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr6:143105000-143105400 Flanking Active TSS GM12878-XiMat blood
47 chr6:143105000-143105600 Enhancers HSMM muscle
48 chr6:143105000-143105800 Enhancers Primary T killer naive cells fromperipheralblood blood
49 chr6:143105000-143105800 Enhancers Osteobl bone
50 chr6:143105000-143106000 Enhancers Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015