Variant report

Variant rs198826
Chromosome Location chr6:26121153-26121154
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26104800-26122600 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr6:26105000-26122600 Weak transcription Right Atrium heart
3 chr6:26107600-26122800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr6:26108400-26121200 Weak transcription Fetal Intestine Small intestine
5 chr6:26110400-26122600 Weak transcription Primary B cells from cord blood blood
6 chr6:26114200-26121800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr6:26115800-26122400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr6:26115800-26122400 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr6:26115800-26122600 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr6:26116000-26121200 Weak transcription Stomach Mucosa stomach
11 chr6:26116200-26121600 Weak transcription Primary T cells from cord blood blood
12 chr6:26116800-26121400 Weak transcription Thymus Thymus
13 chr6:26119400-26122400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr6:26119400-26122600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr6:26119400-26122600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr6:26119600-26121200 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr6:26119600-26121200 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr6:26119600-26121200 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr6:26119600-26121200 Active TSS K562 blood
20 chr6:26119600-26121200 Weak transcription NH-A brain
21 chr6:26119600-26121400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr6:26119600-26122400 Weak transcription H1 Cell Line embryonic stem cell
23 chr6:26119600-26122400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr6:26119600-26122400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr6:26119600-26122400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr6:26119600-26122600 Weak transcription Brain Anterior Caudate brain
27 chr6:26119600-26122600 Weak transcription Brain Hippocampus Middle brain
28 chr6:26119600-26123400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr6:26119800-26121200 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr6:26119800-26121400 Weak transcription HMEC breast
31 chr6:26119800-26122600 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr6:26119800-26122600 Weak transcription Brain Substantia Nigra brain
33 chr6:26120200-26122400 Enhancers Fetal Thymus thymus
34 chr6:26120400-26121800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr6:26120600-26122000 Enhancers Small Intestine intestine
36 chr6:26120600-26122400 Enhancers Dnd41 blood
37 chr6:26120800-26121400 Flanking Active TSS Liver Liver
38 chr6:26120800-26121400 Enhancers Fetal Kidney kidney
39 chr6:26120800-26121600 Enhancers Brain Cingulate Gyrus brain
40 chr6:26120800-26122400 Active TSS A549 lung
41 chr6:26120800-26122800 Flanking Active TSS HepG2 liver
42 chr6:26121000-26121200 Enhancers Duodenum Mucosa Duodenum
43 chr6:26121000-26122000 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr6:26121000-26122000 Flanking Active TSS GM12878-XiMat blood
45 chr6:26121000-26122400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr6:26121000-26122600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr6:26121000-26122600 Enhancers Fetal Intestine Large intestine

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