Variant report

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr19:51380511-51380583	GM12891	blood:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:51372696..51375845-chr19:51379331..51383690,4	K562	blood:
2	chr19:51295821..51300740-chr19:51378160..51386074,7	K562	blood:
3	chr19:51374203..51378024-chr19:51378917..51381093,3	MCF-7	breast:
4	chr19:51295821..51300740-chr19:51378160..51386074,8	K562	blood:
5	chr19:51301541..51303220-chr19:51379402..51381773,3	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KLK2-1	chr19:51379728-51380551	NONHSAT067387
2	lnc-KLK2-1	chr19:51380141-51380668	NONHSAT067390

No data

rSNPs within LD-proxies of this variant (count:3)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1060760	chr19:50883425-51463712	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
2	nsv1058177	chr19:50984774-51463712	Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	84 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:51378200-51380600	Enhancers	Primary B cells from peripheral blood	blood
2	chr19:51379800-51380600	Enhancers	GM12878-XiMat	blood
3	chr19:51379800-51380800	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
4	chr19:51380000-51380600	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
5	chr19:51380000-51380600	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
6	chr19:51380000-51381400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr19:51380200-51380800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr19:51380400-51380600	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
9	chr19:51380400-51381000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
10	chr19:51380400-51381200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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