Variant report

Variant rs1992477
Chromosome Location chr19:53609967-53609968
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53607200-53610800 Weak transcription Fetal Brain Male brain
2 chr19:53607200-53611600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr19:53607200-53611800 Weak transcription Lung lung
4 chr19:53607200-53611800 Weak transcription Spleen Spleen
5 chr19:53607200-53612000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr19:53607200-53612000 Weak transcription Small Intestine intestine
7 chr19:53607200-53614600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr19:53607200-53615400 Weak transcription Esophagus oesophagus
9 chr19:53607400-53610200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr19:53607400-53610200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr19:53607400-53610800 Weak transcription Colon Smooth Muscle Colon
12 chr19:53607400-53611200 Weak transcription H1 Cell Line embryonic stem cell
13 chr19:53607400-53611200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr19:53607400-53611200 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr19:53607400-53611200 Weak transcription Brain Angular Gyrus brain
16 chr19:53607400-53611200 Weak transcription Brain Cingulate Gyrus brain
17 chr19:53607400-53611200 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr19:53607400-53611200 Weak transcription Fetal Heart heart
19 chr19:53607400-53611200 Weak transcription Placenta Amnion Placenta Amnion
20 chr19:53607400-53611400 Weak transcription H9 Cell Line embryonic stem cell
21 chr19:53607400-53611400 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr19:53607400-53611400 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr19:53607400-53611800 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr19:53607400-53611800 Weak transcription Fetal Kidney kidney
25 chr19:53607400-53611800 Weak transcription Left Ventricle heart
26 chr19:53607400-53611800 Weak transcription Ovary ovary
27 chr19:53607400-53611800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr19:53607400-53611800 Weak transcription Rectal Smooth Muscle rectum
29 chr19:53607400-53611800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr19:53607400-53611800 Weak transcription NHDF-Ad bronchial
31 chr19:53607400-53612000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr19:53607400-53612000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr19:53607400-53612200 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr19:53607400-53612200 Weak transcription HSMMtube muscle
35 chr19:53607400-53612400 Weak transcription Colonic Mucosa Colon
36 chr19:53607400-53615400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr19:53607400-53615400 Weak transcription Thymus Thymus
38 chr19:53607400-53630600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr19:53607600-53610200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr19:53607600-53610600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr19:53607600-53610800 Weak transcription Fetal Intestine Large intestine
42 chr19:53607600-53611000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr19:53607600-53611200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr19:53607600-53611200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr19:53607600-53611200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr19:53607600-53611200 Weak transcription Adipose Nuclei Adipose
47 chr19:53607600-53611200 Weak transcription Brain Germinal Matrix brain
48 chr19:53607600-53611200 Weak transcription Psoas Muscle Psoas
49 chr19:53607600-53611200 Weak transcription Osteobl bone
50 chr19:53607600-53611400 Weak transcription Brain Substantia Nigra brain

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