Variant report

Variant rs199527
Chromosome Location chr17:44843667-44843668
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44820600-44844400 Weak transcription Small Intestine intestine
2 chr17:44828400-44847800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr17:44829600-44844000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr17:44829800-44848000 Weak transcription Fetal Kidney kidney
5 chr17:44832400-44847800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr17:44834000-44846800 Weak transcription Ovary ovary
7 chr17:44834400-44846400 Strong transcription Fetal Intestine Small intestine
8 chr17:44834600-44843800 Weak transcription Stomach Smooth Muscle stomach
9 chr17:44834600-44846400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr17:44834600-44847200 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr17:44834600-44848000 Weak transcription Brain Cingulate Gyrus brain
12 chr17:44834600-44848400 Weak transcription Aorta Aorta
13 chr17:44834800-44847000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr17:44834800-44847800 Weak transcription Dnd41 blood
15 chr17:44835000-44846800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr17:44836400-44846800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr17:44837200-44844200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr17:44837400-44846800 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr17:44837400-44846800 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr17:44837600-44846800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr17:44839000-44844800 Strong transcription Fetal Stomach stomach
22 chr17:44839400-44846800 Weak transcription Primary B cells from cord blood blood
23 chr17:44841200-44845000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr17:44841400-44844600 Enhancers Brain Germinal Matrix brain
25 chr17:44841400-44845800 Enhancers Cortex derived primary cultured neurospheres brain
26 chr17:44841600-44846800 Weak transcription Primary B cells from peripheral blood blood
27 chr17:44841600-44846800 Weak transcription Fetal Intestine Large intestine
28 chr17:44841800-44844600 Enhancers Fetal Brain Male brain
29 chr17:44841800-44847600 Weak transcription Liver Liver
30 chr17:44842200-44844000 Enhancers Brain Inferior Temporal Lobe brain
31 chr17:44842400-44847800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr17:44842600-44844200 Weak transcription HepG2 liver
33 chr17:44842600-44847600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr17:44842800-44844200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr17:44842800-44845600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr17:44842800-44845800 Weak transcription A549 lung
37 chr17:44842800-44846800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr17:44842800-44846800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr17:44842800-44846800 Weak transcription Gastric stomach
40 chr17:44842800-44847400 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr17:44843000-44844200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr17:44843000-44844200 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr17:44843000-44845800 Weak transcription Fetal Muscle Leg muscle
44 chr17:44843000-44846800 Weak transcription Adipose Nuclei Adipose
45 chr17:44843000-44846800 Weak transcription Brain Substantia Nigra brain
46 chr17:44843000-44846800 Weak transcription NHDF-Ad bronchial
47 chr17:44843000-44846800 Weak transcription Osteobl bone
48 chr17:44843000-44847200 Weak transcription Brain Anterior Caudate brain
49 chr17:44843000-44848400 Weak transcription Brain Angular Gyrus brain
50 chr17:44843200-44844000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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