Variant report

Variant	rs199535
Chromosome Location	chr17:44822662-44822663
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr17:44821369..44826185-chr17:44846753..44849990,6	K562	blood:
2	chr17:44820992..44822869-chr17:44847358..44849527,2	K562	blood:
3	chr17:44799962..44803131-chr17:44820339..44824064,3	K562	blood:

Extended variants
information (count: 88 )
Associated
traits (count: 91 )

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs1378358	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs142167	0.89[CEU][hapmap]
rs169201	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs183211	0.89[CEU][hapmap]
rs199436	0.89[CEU][hapmap]
rs199438	0.89[CEU][hapmap]
rs199439	0.91[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199442	0.89[CEU][hapmap];0.82[TSI][hapmap];0.81[EUR][1000 genomes]
rs199443	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199444	0.89[CEU][hapmap];0.82[TSI][hapmap];0.81[EUR][1000 genomes]
rs199445	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199447	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199448	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199449	0.89[CEU][hapmap];0.82[TSI][hapmap];0.80[EUR][1000 genomes]
rs199451	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199452	0.89[CEU][hapmap]
rs199453	0.89[CEU][hapmap]
rs199454	0.89[CEU][hapmap]
rs199455	0.89[CEU][hapmap]
rs199456	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199457	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199498	0.88[CEU][hapmap]
rs199499	1.00[ASN][1000 genomes]
rs199501	0.83[CEU][hapmap]
rs199503	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199504	0.91[CEU][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199505	0.94[CEU][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199506	0.94[CEU][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199507	0.94[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199509	0.94[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199510	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199512	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199513	0.94[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199514	0.94[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199515	0.94[CEU][hapmap];1.00[GIH][hapmap];0.91[MEX][hapmap];0.90[TSI][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199516	0.94[CEU][hapmap];0.89[EUR][1000 genomes]
rs199520	0.82[CEU][hapmap]
rs199524	0.83[CEU][hapmap]
rs199525	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199526	0.81[EUR][1000 genomes]
rs199528	0.94[CEU][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199529	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199531	0.80[EUR][1000 genomes]
rs199533	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199534	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs199536	0.89[CEU][hapmap];0.80[EUR][1000 genomes]
rs415430	0.94[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs430685	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs538628	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs70600	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs70602	0.94[CEU][hapmap];0.89[EUR][1000 genomes]
rs916888	1.00[ASN][1000 genomes]
rs9895805	1.00[LWK][hapmap];1.00[YRI][hapmap]
rs9896243	1.00[CEU][hapmap];1.00[GIH][hapmap];0.90[MEX][hapmap];0.89[TSI][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9905415	0.88[LWK][hapmap]
rs9911982	1.00[LWK][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:32 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431716	chr17:43893020-44868187	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
2	nsv431718	chr17:44094463-44873614	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv431730	chr17:44144214-44826056	Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
4	nsv431729	chr17:44144214-44869063	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
5	esv2757660	chr17:44162284-44868187	Enhancers Genic enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
6	nsv431805	chr17:44165803-44868430	Weak transcription Enhancers Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
7	esv3492820	chr17:44174959-45161556	Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
8	esv3492821	chr17:44174959-45161556	Weak transcription Genic enhancers Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
9	nsv543374	chr17:44223908-44824353	Genic enhancers Enhancers Bivalent/Poised TSS Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
10	nsv916432	chr17:44223908-44873614	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
11	esv3502492	chr17:44305975-45169159	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
12	esv3502493	chr17:44305975-45169159	Active TSS Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
13	esv1819056	chr17:44391822-44873614	Enhancers Strong transcription Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
14	esv1844763	chr17:44391822-44913631	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
15	nsv428343	chr17:44391822-44913631	Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
16	esv1806073	chr17:44443111-44873614	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
17	nsv531823	chr17:44485771-45067769	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
18	esv1850605	chr17:44537030-44913631	Weak transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
19	esv1792649	chr17:44627136-44849634	Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
20	esv1820936	chr17:44629166-44848916	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
21	esv1812673	chr17:44648058-44849188	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
22	esv1818423	chr17:44648058-44849634	Weak transcription Flanking Bivalent TSS/Enh Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
23	esv1805955	chr17:44654416-44849188	Strong transcription Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
24	esv1818944	chr17:44662268-44859144	Genic enhancers Weak transcription Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
25	nsv471402	chr17:44668038-44834833	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
26	esv1796587	chr17:44680207-44849634	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
27	esv1803101	chr17:44680207-44849634	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
28	esv1803756	chr17:44680207-44865439	Strong transcription Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
29	nsv833465	chr17:44706496-44889749	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
30	esv1843460	chr17:44732200-44913631	Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
31	esv1810528	chr17:44814884-44849634	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region miRNA target site	13 gene(s)	inside rSNPs	diseases
32	esv1845488	chr17:44816132-44849634	Weak transcription Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region miRNA target site	13 gene(s)	inside rSNPs	diseases

mRNA abundance (count:91)

SNP	Gene	Cis/trans	Tissue	Source
rs199535	RP11-259G18.2	cis	Artery Aorta	GTEx
rs199535	SP6	cis	cerebellum	SCAN
rs199535	LRRC37A	cis	Stomach	GTEx
rs199535	LOC644246	cis	lesional skin	skin_eQTL
rs199535	RP11-259G18.2	cis	Artery Tibial	GTEx
rs199535	MAPT	cis	brain	seeQTL
rs199535	RP11-259G18.3	cis	Esophagus Muscularis	GTEx
rs199535	LRRC37A	cis	Skin Sun Exposed Lower leg	GTEx
rs199535	LRRC37A2	cis	Heart Left Ventricle	GTEx
rs199535	RP11-259G18.2	cis	Esophagus Muscularis	GTEx
rs199535	LRRC37A	cis	Esophagus Muscularis	GTEx
rs199535	KANSL1-AS1	cis	Skin Sun Exposed Lower leg	GTEx
rs199535	KANSL1-AS1	cis	Heart Left Ventricle	GTEx
rs199535	MAPK8IP1	cis	Cerebellum	GTEx
rs199535	RP11-259G18.2	cis	Thyroid	GTEx
rs199535	RP11-259G18.3	cis	Heart Left Ventricle	GTEx
rs199535	KANSL1-AS1	cis	Adipose Subcutaneous	GTEx
rs199535	RP11-669E14.6	cis	Thyroid	GTEx
rs199535	MAPT	cis	Cerebellum	GTEx
rs199535	LRRC37A2	cis	Esophagus Mucosa	GTEx
rs199535	LRRC37A	cis	Frontal Cortex	GTEx
rs199535	LOC644246///LOC649063	cis	uninvolved skin	skin_eQTL
rs199535	LRRC37A2	cis	lung	GTEx
rs199535	LRRC37A	cis	Nerve Tibial	GTEx
rs199535	RP11-259G18.2	cis	lung	GTEx
rs199535	LRRC37A17P	cis	Esophagus Mucosa	GTEx
rs199535	LRRC37A	cis	Artery Aorta	GTEx
rs199535	LRRC37A2	cis	Stomach	GTEx
rs199535	RP11-259G18.2	cis	Muscle Skeletal	GTEx
rs199535	LRRC37A	cis	Muscle Skeletal	GTEx
rs199535	LRRC37A2	cis	Whole Blood	GTEx
rs199535	KANSL1-AS1	cis	Muscle Skeletal	GTEx
rs199535	WNT3	cis	Thyroid	GTEx
rs199535	KANSL1-AS1	cis	Nerve Tibial	GTEx
rs199535	RP11-259G18.2	cis	Heart Left Ventricle	GTEx
rs199535	MAPT	cis	Frontal Cortex	GTEx
rs199535	NSF	cis	normal skin	skin_eQTL
rs199535	RP11-259G18.3	cis	Whole Blood	GTEx
rs199535	RP11-259G18.2	cis	Esophagus Mucosa	GTEx
rs199535	RP11-259G18.3	cis	Esophagus Mucosa	GTEx
rs199535	LRRC37A	cis	brain	seeQTL
rs199535	KANSL1-AS1	cis	Artery Aorta	GTEx
rs199535	RP11-259G18.2	cis	Skin Sun Exposed Lower leg	GTEx
rs199535	RP11-259G18.3	cis	Nerve Tibial	GTEx
rs199535	LRRC37A2	cis	Esophagus Muscularis	GTEx
rs199535	LRRC37A2	cis	Adipose Subcutaneous	GTEx
rs199535	LRRC37A	cis	Esophagus Mucosa	GTEx
rs199535	KIAA1267	cis	uninvolved skin	skin_eQTL
rs199535	LRRC37A2	cis	Skin Sun Exposed Lower leg	GTEx
rs199535	KANSL1-AS1	cis	Stomach	GTEx
rs199535	RP11-259G18.2	cis	Whole Blood	GTEx
rs199535	RP11-259G18.3	cis	Stomach	GTEx
rs199535	LRRC37A2	cis	Thyroid	GTEx
rs199535	LOC474170	cis	uninvolved skin	skin_eQTL
rs199535	FMNL1	cis	cerebellum	SCAN
rs199535	LOC644246///LOC649063	cis	lesional skin	skin_eQTL
rs199535	RP11-259G18.3	cis	Skin Sun Exposed Lower leg	GTEx
rs199535	LRRC37A	cis	Adipose Subcutaneous	GTEx
rs199535	KANSL1-AS1	cis	Artery Tibial	GTEx
rs199535	LOC644246///LOC649063	cis	normal skin	skin_eQTL
rs199535	BRWD1	cis	Liver	GTEx
rs199535	KRT26	cis	cerebellum	SCAN
rs199535	RP11-259G18.3	cis	Thyroid	GTEx
rs199535	KIAA1267	cis	lesional skin	skin_eQTL
rs199535	HAP1	cis	cerebellum	SCAN
rs199535	RP11-259G18.2	cis	Adipose Subcutaneous	GTEx
rs199535	LRRC37A2	cis	Muscle Skeletal	GTEx
rs199535	LRRC37A2	cis	Artery Aorta	GTEx
rs199535	LRRC37A	trans	brain	seeQTL
rs199535	RP11-259G18.3	cis	Adipose Subcutaneous	GTEx
rs199535	KIAA1267	cis	normal skin	skin_eQTL
rs199535	LRRC37A2	cis	Nerve Tibial	GTEx
rs199535	LRRC37A2	cis	Artery Tibial	GTEx
rs199535	RP11-259G18.2	cis	Nerve Tibial	GTEx
rs199535	ARL17B	cis	lymphoblastoid	seeQTL
rs199535	RP11-259G18.2	cis	Stomach	GTEx
rs199535	LOC644246	cis	uninvolved skin	skin_eQTL
rs199535	RP11-259G18.3	cis	Muscle Skeletal	GTEx
rs199535	KANSL1-AS1	cis	lung	GTEx
rs199535	RP11-259G18.3	cis	lung	GTEx
rs199535	LRRC37A	cis	Artery Tibial	GTEx
rs199535	SLC25A39	cis	cerebellum	SCAN
rs199535	KANSL1-AS1	cis	Whole Blood	GTEx
rs199535	KANSL1-AS1	cis	Esophagus Mucosa	GTEx
rs199535	RP11-259G18.3	cis	Artery Aorta	GTEx
rs199535	LRRC37A	cis	Thyroid	GTEx
rs199535	KANSL1-AS1	cis	Thyroid	GTEx
rs199535	KANSL1-AS1	cis	Esophagus Muscularis	GTEx
rs199535	GJC1	cis	parietal	SCAN
rs199535	LRRC37A	cis	lung	GTEx
rs199535	RP11-259G18.3	cis	Artery Tibial	GTEx

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:44780800-44835200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr17:44786600-44827800	Weak transcription	Brain Hippocampus Middle	brain
3	chr17:44789200-44833200	Weak transcription	Brain Cingulate Gyrus	brain
4	chr17:44791400-44828800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
5	chr17:44792000-44826400	Weak transcription	Placenta	Placenta
6	chr17:44792600-44829200	Weak transcription	Brain Germinal Matrix	brain
7	chr17:44792800-44828800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
8	chr17:44793600-44842200	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr17:44795600-44828600	Weak transcription	Rectal Smooth Muscle	rectum
10	chr17:44798000-44828800	Weak transcription	Brain Anterior Caudate	brain
11	chr17:44798600-44832400	Weak transcription	Psoas Muscle	Psoas
12	chr17:44798600-44833200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr17:44798600-44833200	Weak transcription	Gastric	stomach
14	chr17:44798600-44841800	Weak transcription	Right Ventricle	heart
15	chr17:44798800-44827000	Weak transcription	Colonic Mucosa	Colon
16	chr17:44798800-44828800	Weak transcription	Brain Angular Gyrus	brain
17	chr17:44800000-44828800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr17:44800200-44828600	Weak transcription	Ovary	ovary
19	chr17:44800600-44828800	Weak transcription	Fetal Kidney	kidney
20	chr17:44802400-44828800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr17:44803600-44825800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
22	chr17:44805600-44827400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
23	chr17:44805800-44828000	Weak transcription	HepG2	liver
24	chr17:44808600-44826600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
25	chr17:44808600-44827800	Weak transcription	Liver	Liver
26	chr17:44808800-44826600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
27	chr17:44810400-44827200	Weak transcription	Fetal Thymus	thymus
28	chr17:44810800-44828000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
29	chr17:44811000-44829200	Weak transcription	Aorta	Aorta
30	chr17:44811000-44829200	Weak transcription	Brain Inferior Temporal Lobe	brain
31	chr17:44811200-44828800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr17:44811600-44826800	Weak transcription	Dnd41	blood
33	chr17:44811600-44828800	Weak transcription	Skeletal Muscle Female	skeletal muscle
34	chr17:44812000-44829000	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr17:44814000-44828800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr17:44814400-44839000	Weak transcription	Fetal Brain Female	brain
37	chr17:44814600-44826200	Weak transcription	GM12878-XiMat	blood
38	chr17:44816200-44822800	Weak transcription	Primary B cells from peripheral blood	blood
39	chr17:44816200-44826000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
40	chr17:44818600-44829200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
41	chr17:44818600-44832600	Weak transcription	HUES6 Cell Line	embryonic stem cell
42	chr17:44818800-44842200	Weak transcription	H9 Cell Line	embryonic stem cell
43	chr17:44819200-44827200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr17:44819200-44841400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
45	chr17:44820000-44825600	Weak transcription	Primary T helper cells PMA-I stimulated	--
46	chr17:44820200-44826000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr17:44820200-44833200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr17:44820200-44834200	Weak transcription	Colon Smooth Muscle	Colon
49	chr17:44820600-44827000	Weak transcription	Left Ventricle	heart
50	chr17:44820600-44827600	Weak transcription	Primary hematopoietic stem cells	blood

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