| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1014005 |
chr1:118540498-119022098 |
Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv3494191 |
chr1:118772550-119719548 |
Enhancers Strong transcription Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
40 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
esv3494192 |
chr1:118772550-119719548 |
Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
40 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1006143 |
chr1:118886864-119037964 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv535073 |
chr1:118886864-119037964 |
Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv872168 |
chr1:118909283-119002799 |
Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
nsv1001757 |
chr1:118973624-119048181 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1004804 |
chr1:118975209-119048663 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv1003425 |
chr1:118983592-119045934 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv535074 |
chr1:118983592-119045934 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv525369 |
chr1:118987888-118992961 |
ZNF genes & repeats Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page:
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