Variant report

Variant	rs199600660
Chromosome Location	chr11:121068742-121068743
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975384	chr11:121067538-121074700	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121058800-121069000	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr11:121062600-121070000	Weak transcription	Fetal Heart	heart
3	chr11:121064600-121069000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr11:121065800-121070200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr11:121066000-121068800	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr11:121066000-121068800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr11:121066000-121068800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr11:121066000-121069200	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr11:121066400-121069200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr11:121066400-121069200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr11:121068400-121069200	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr11:121068600-121069400	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr11:121068600-121069400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links