Variant report

Variant	rs199667265
Chromosome Location	chr4:74603901-74603902
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001725	chr4:74354050-74860924	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	nsv530126	chr4:74376622-74843892	Bivalent Enhancer Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv1008104	chr4:74468434-74621952	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
4	nsv1012198	chr4:74487793-74621952	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
5	nsv537139	chr4:74487793-74621952	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
6	nsv1005231	chr4:74555497-74680079	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
7	nsv980219	chr4:74603561-74618789	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:74596400-74605400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:74596400-74606000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr4:74598000-74605200	Weak transcription	Left Ventricle	heart
4	chr4:74600400-74605400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr4:74600400-74606200	Weak transcription	Primary B cells from cord blood	blood
6	chr4:74600600-74605200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr4:74600600-74606200	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr4:74600800-74605400	Weak transcription	NH-A	brain
9	chr4:74600800-74605800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr4:74600800-74606200	Weak transcription	HMEC	breast
11	chr4:74601200-74605000	Weak transcription	Hela-S3	cervix
12	chr4:74601200-74605200	Weak transcription	Small Intestine	intestine
13	chr4:74601200-74605200	Weak transcription	NHLF	lung
14	chr4:74601200-74605400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr4:74601200-74605400	Weak transcription	Adipose Nuclei	Adipose
16	chr4:74601400-74605200	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr4:74601400-74605600	Weak transcription	NHEK	skin
18	chr4:74601400-74606000	Weak transcription	Osteobl	bone
19	chr4:74601600-74604400	Weak transcription	K562	blood
20	chr4:74601600-74604800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr4:74601600-74605400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr4:74601600-74605400	Weak transcription	Primary hematopoietic stem cells	blood
23	chr4:74601600-74605600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr4:74601800-74604200	Weak transcription	HUVEC	blood vessel
25	chr4:74601800-74604800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
26	chr4:74602000-74604400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr4:74602000-74605400	Weak transcription	Monocytes-CD14+_RO01746	blood
28	chr4:74602200-74605000	Weak transcription	Primary neutrophils fromperipheralblood	blood
29	chr4:74602400-74605400	Weak transcription	Primary monocytes fromperipheralblood	blood
30	chr4:74602400-74605400	Weak transcription	A549	lung

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