| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv949481 |
chrX:5883977-6401143 |
Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv533221 |
chrX:5970948-6352423 |
ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv948484 |
chrX:6057749-6401143 |
Enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv869533 |
chrX:6138534-7087750 |
Enhancers ZNF genes & repeats Strong transcription Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv524163 |
chrX:6184334-6418059 |
Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionChromatin interactive regionlncRNAmiRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv2422345 |
chrX:6279519-6709757 |
Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv1524648 |
chrX:6282303-6282305 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015