Variant report

Variant rs199689
Chromosome Location chr1:77494679-77494680
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77485200-77494800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:77485200-77495200 Weak transcription Ovary ovary
3 chr1:77486200-77495800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:77486200-77496600 Weak transcription NHEK skin
5 chr1:77490600-77499200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:77490800-77495000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:77491800-77497000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:77492400-77495600 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr1:77492400-77498600 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:77492800-77496600 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr1:77493200-77495000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:77493400-77499200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:77493800-77496200 Weak transcription Colon Smooth Muscle Colon
14 chr1:77493800-77496400 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr1:77493800-77498800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:77493800-77503400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:77494000-77496200 Weak transcription Fetal Stomach stomach
18 chr1:77494200-77498000 Weak transcription Rectal Smooth Muscle rectum
19 chr1:77494400-77495400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:77494400-77497000 Enhancers Cortex derived primary cultured neurospheres brain

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