Variant report

Variant rs199698
Chromosome Location chr1:77506217-77506218
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:15 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77497000-77516800 Weak transcription Fetal Stomach stomach
2 chr1:77503400-77506400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:77503400-77506600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:77503600-77506400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:77503600-77506800 Enhancers HMEC breast
6 chr1:77503800-77512200 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr1:77504600-77506400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:77505000-77506400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
9 chr1:77505000-77506800 Genic enhancers Cortex derived primary cultured neurospheres brain
10 chr1:77505800-77508800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:77506000-77509800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:77506000-77558600 Weak transcription Stomach Smooth Muscle stomach
13 chr1:77506200-77506400 Enhancers Muscle Satellite Cultured Cells --
14 chr1:77506200-77506600 Enhancers NHEK skin
15 chr1:77506200-77510200 Weak transcription Rectal Smooth Muscle rectum

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