Variant report

Variant rs199703
Chromosome Location chr1:77517887-77517888
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77506000-77558600 Weak transcription Stomach Smooth Muscle stomach
2 chr1:77508600-77547600 Weak transcription Ovary ovary
3 chr1:77511800-77520600 Weak transcription Brain Angular Gyrus brain
4 chr1:77513200-77523600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:77514200-77519000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:77515800-77518400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:77516000-77524000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:77517000-77518000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:77517000-77518000 Enhancers Brain Germinal Matrix brain
10 chr1:77517000-77518200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:77517000-77519800 Weak transcription Fetal Intestine Large intestine
12 chr1:77517000-77521400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:77517200-77521200 Strong transcription Cortex derived primary cultured neurospheres brain
14 chr1:77517400-77518200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:77517400-77519400 Weak transcription Fetal Stomach stomach
16 chr1:77517400-77528800 Weak transcription Aorta Aorta
17 chr1:77517600-77518800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr1:77517600-77521800 Weak transcription NHEK skin
19 chr1:77517800-77521600 Weak transcription Fetal Brain Female brain

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