Variant report

Variant	rs199760144
Chromosome Location	chr7:14236423-14236424
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949467	chr7:13938464-14279074	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1015312	chr7:14092753-14266917	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1021056	chr7:14162525-14269443	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv1025437	chr7:14226741-14295671	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases
6	esv3395757	chr7:14236091-14236474	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14231600-14236600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr7:14233600-14237800	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr7:14233800-14238000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr7:14234400-14237200	Enhancers	Brain Hippocampus Middle	brain
5	chr7:14234800-14237000	Enhancers	NH-A	brain
6	chr7:14235000-14236800	Enhancers	Brain Substantia Nigra	brain
7	chr7:14235200-14237000	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr7:14235400-14237600	Enhancers	Muscle Satellite Cultured Cells	--
9	chr7:14235600-14236600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr7:14235600-14236800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr7:14235600-14236800	Enhancers	HMEC	breast
12	chr7:14235600-14236800	Enhancers	NHEK	skin
13	chr7:14235600-14237400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr7:14235600-14237600	Enhancers	HSMMtube	muscle
15	chr7:14235600-14237800	Enhancers	HSMM	muscle
16	chr7:14235800-14236800	Weak transcription	Brain Angular Gyrus	brain
17	chr7:14235800-14237600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr7:14235800-14237600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
19	chr7:14236000-14236600	Weak transcription	Brain Anterior Caudate	brain
20	chr7:14236000-14237000	Weak transcription	Brain Cingulate Gyrus	brain
21	chr7:14236400-14236800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr7:14236400-14237600	Enhancers	Brain Germinal Matrix	brain
23	chr7:14236400-14237800	Enhancers	Fetal Heart	heart

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