Variant report

Variant	rs1998750
Chromosome Location	chr10:44408937-44408938
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051921	chr10:44378011-44458880	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44401200-44409200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr10:44406400-44409200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr10:44406400-44409400	Weak transcription	Left Ventricle	heart
4	chr10:44406400-44417800	Weak transcription	Right Atrium	heart
5	chr10:44406800-44421800	Weak transcription	Fetal Heart	heart
6	chr10:44407600-44409800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr10:44408000-44409600	Enhancers	HMEC	breast
8	chr10:44408000-44409800	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr10:44408200-44409800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr10:44408200-44409800	Enhancers	GM12878-XiMat	blood
11	chr10:44408200-44424000	Weak transcription	Right Ventricle	heart
12	chr10:44408400-44409600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr10:44408400-44409600	Enhancers	Primary T cells fromperipheralblood	blood
14	chr10:44408400-44409800	Enhancers	NHEK	skin
15	chr10:44408600-44409400	Weak transcription	Spleen	Spleen
16	chr10:44408800-44409000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
17	chr10:44408800-44409400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr10:44408800-44409800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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