Variant report

Variant rs1998761
Chromosome Location chr1:59347152-59347153
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59319800-59361400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:59340800-59348600 Weak transcription Placenta Placenta
3 chr1:59341000-59347200 Weak transcription Gastric stomach
4 chr1:59341000-59347200 Weak transcription Ovary ovary
5 chr1:59341000-59347200 Weak transcription HSMM muscle
6 chr1:59341000-59348400 Weak transcription Fetal Muscle Trunk muscle
7 chr1:59341000-59348600 Weak transcription Fetal Brain Male brain
8 chr1:59341200-59348600 Weak transcription HSMMtube muscle
9 chr1:59341200-59350200 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr1:59341400-59348600 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:59341600-59348800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:59341800-59347200 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr1:59341800-59347600 Weak transcription Brain Anterior Caudate brain
14 chr1:59342800-59347200 Weak transcription Pancreas Pancrea
15 chr1:59344800-59356000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:59345000-59348600 Enhancers Monocytes-CD14+_RO01746 blood
17 chr1:59346200-59348200 Enhancers Rectal Mucosa Donor 31 rectum
18 chr1:59346200-59348800 Enhancers Hela-S3 cervix
19 chr1:59346200-59348800 Enhancers K562 blood
20 chr1:59346200-59350600 Enhancers HepG2 liver
21 chr1:59346200-59353600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:59346200-59353800 Enhancers Psoas Muscle Psoas
23 chr1:59346400-59349800 Enhancers HMEC breast
24 chr1:59346400-59353400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:59346400-59354000 Enhancers Fetal Intestine Small intestine
26 chr1:59346600-59347200 Enhancers A549 lung
27 chr1:59346600-59352000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:59346600-59352000 Enhancers HUVEC blood vessel
29 chr1:59346600-59354000 Enhancers Fetal Intestine Large intestine
30 chr1:59346800-59347400 Enhancers Right Ventricle heart
31 chr1:59346800-59348000 Enhancers Placenta Amnion Placenta Amnion
32 chr1:59346800-59349000 Enhancers NHLF lung
33 chr1:59346800-59349800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:59346800-59351200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:59346800-59352000 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr1:59346800-59353400 Enhancers Primary monocytes fromperipheralblood blood
37 chr1:59347000-59347200 Enhancers Primary hematopoietic stem cells blood
38 chr1:59347000-59347400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:59347000-59347400 Enhancers Spleen Spleen
40 chr1:59347000-59348000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:59347000-59348800 Enhancers Primary neutrophils fromperipheralblood blood
42 chr1:59347000-59349000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:59347000-59349000 Enhancers Duodenum Mucosa Duodenum
44 chr1:59347000-59349000 Enhancers Esophagus oesophagus
45 chr1:59347000-59349600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:59347000-59349800 Enhancers Osteobl bone
47 chr1:59347000-59350000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:59347000-59350000 Enhancers NHEK skin
49 chr1:59347000-59350400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:59347000-59351200 Enhancers Skeletal Muscle Male skeletal muscle

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