Variant report

Variant	rs199939183
Chromosome Location	chr4:15847125-15847126
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012988	chr4:15597510-16091527	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv916742	chr4:15797994-16064232	Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
3	nsv878714	chr4:15840839-15895791	Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
4	nsv878715	chr4:15840839-15947493	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
5	esv3447155	chr4:15843004-15849402	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3390489	chr4:15843095-15849390	Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3464817	chr4:15843115-15849373	Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3464818	chr4:15843115-15849373	Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:15811400-15851200	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr4:15811400-15852200	Weak transcription	Spleen	Spleen
3	chr4:15819200-15853400	Weak transcription	Duodenum Mucosa	Duodenum
4	chr4:15827600-15853400	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr4:15834800-15851800	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr4:15834800-15852800	Weak transcription	Primary B cells from peripheral blood	blood
7	chr4:15835000-15857400	Weak transcription	Psoas Muscle	Psoas
8	chr4:15840400-15855400	Weak transcription	Liver	Liver
9	chr4:15842600-15854400	Weak transcription	Left Ventricle	heart
10	chr4:15842600-15856600	Weak transcription	Primary T helper cells fromperipheralblood	blood
11	chr4:15843000-15853600	Weak transcription	Primary T cells fromperipheralblood	blood
12	chr4:15843200-15849400	Weak transcription	Primary T cells from cord blood	blood
13	chr4:15843200-15849400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr4:15843200-15849400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr4:15843200-15849400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr4:15843200-15849400	Weak transcription	Fetal Thymus	thymus
17	chr4:15843200-15849400	Weak transcription	Thymus	Thymus
18	chr4:15843200-15849600	Weak transcription	Primary monocytes fromperipheralblood	blood
19	chr4:15843200-15849800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr4:15843200-15850200	Weak transcription	Primary hematopoietic stem cells	blood
21	chr4:15843200-15852000	Weak transcription	Primary B cells from cord blood	blood
22	chr4:15843200-15852000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
23	chr4:15843200-15852000	Weak transcription	Monocytes-CD14+_RO01746	blood
24	chr4:15843200-15853000	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr4:15843400-15849400	Weak transcription	Dnd41	blood

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