Variant report

Variant	rs199967701
Chromosome Location	chr14:78636757-78636758
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:78629719..78632310-chr14:78635472..78637600,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1366	chr14:78633044-78677718	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1038627	chr14:78635498-78657912	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78630800-78636800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr14:78632400-78636800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr14:78636200-78636800	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr14:78636200-78636800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:78636200-78636800	Enhancers	Brain Cingulate Gyrus	brain
6	chr14:78636200-78636800	Active TSS	Brain Germinal Matrix	brain
7	chr14:78636200-78636800	Enhancers	Lung	lung
8	chr14:78636200-78641800	Active TSS	Fetal Brain Female	brain
9	chr14:78636400-78636800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr14:78636400-78636800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr14:78636400-78636800	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr14:78636400-78636800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr14:78636400-78636800	Weak transcription	Brain Hippocampus Middle	brain
14	chr14:78636400-78636800	Enhancers	Fetal Brain Male	brain
15	chr14:78636400-78641400	Active TSS	Brain Inferior Temporal Lobe	brain
16	chr14:78636600-78636800	Active TSS	iPS-15b Cell Line	embryonic stem cell
17	chr14:78636600-78636800	Flanking Active TSS	Brain Anterior Caudate	brain
18	chr14:78636600-78636800	Active TSS	Fetal Kidney	kidney
19	chr14:78636600-78636800	Bivalent Enhancer	Stomach Smooth Muscle	stomach
20	chr14:78636600-78636800	Bivalent/Poised TSS	A549	lung
21	chr14:78636600-78637000	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr14:78636600-78637000	Active TSS	iPS-20b Cell Line	embryonic stem cell
23	chr14:78636600-78637000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr14:78636600-78637000	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr14:78636600-78637000	Flanking Active TSS	Brain Angular Gyrus	brain
26	chr14:78636600-78637000	Enhancers	Rectal Mucosa Donor 31	rectum
27	chr14:78636600-78637000	Enhancers	Sigmoid Colon	Sigmoid Colon
28	chr14:78636600-78637200	Active TSS	H9 Cell Line	embryonic stem cell
29	chr14:78636600-78637200	Flanking Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr14:78636600-78637200	Active TSS	HUES48 Cell Line	embryonic stem cell
31	chr14:78636600-78637200	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
32	chr14:78636600-78637200	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
33	chr14:78636600-78637200	Active TSS	Colonic Mucosa	Colon
34	chr14:78636600-78637600	Active TSS	H1 Cell Line	embryonic stem cell
35	chr14:78636600-78637600	Active TSS	Cortex derived primary cultured neurospheres	brain
36	chr14:78636600-78639600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain

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