Variant report

Variant	rs200070035
Chromosome Location	chr6:100707060-100707061
allele	-/AA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:100675649..100678406-chr6:100706884..100708922,2	K562	blood:
2	chr6:100675649..100678323-chr6:100706693..100708384,2	K562	blood:
3	chr6:100704664..100707778-chr6:100709218..100711307,3	K562	blood:
4	chr6:100705901..100707480-chr6:100836775..100838969,2	K562	blood:
5	chr6:100704664..100707392-chr6:100709218..100711307,2	K562	blood:
6	chr6:100676458..100678188-chr6:100705698..100707425,2	MCF-7	breast:
7	chr6:100678985..100681308-chr6:100704669..100708291,4	K562	blood:
8	chr6:100679808..100682581-chr6:100705982..100708291,2	K562	blood:

No data

No data

No data

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv17003	chr6:100706818-100707478	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:100702400-100708800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:100703800-100715600	Weak transcription	HSMM	muscle
3	chr6:100704200-100715600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr6:100706400-100707200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr6:100706400-100707600	Enhancers	Dnd41	blood
6	chr6:100706400-100707600	Enhancers	K562	blood
7	chr6:100706400-100708400	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr6:100706400-100708800	Weak transcription	A549	lung
9	chr6:100706400-100709000	Weak transcription	HUVEC	blood vessel
10	chr6:100706400-100714400	Weak transcription	Osteobl	bone
11	chr6:100706400-100716200	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr6:100706600-100707600	Weak transcription	iPS-15b Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links