Variant report

Variant	rs200084579
Chromosome Location	chr2:213530400-213530401
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948878	chr2:213345197-213534298	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2520194	chr2:213529709-213531182	Enhancers	n/a	n/a	inside rSNPs	diseases
3	esv3494264	chr2:213530236-213530651	Enhancers	n/a	n/a	inside rSNPs	diseases
4	esv3494266	chr2:213530247-213530686	Enhancers	n/a	n/a	inside rSNPs	diseases
5	esv1969588	chr2:213530248-213530683	Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3326391	chr2:213530271-213530632	Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3494265	chr2:213530291-213530625	Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3459106	chr2:213530313-213530591	Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv3459107	chr2:213530313-213530591	Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3330076	chr2:213530320-213530565	Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3494267	chr2:213530331-213530605	Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv3451007	chr2:213530340-213530535	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:213529600-213532800	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr2:213530000-213531400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links