Variant report

Variant	rs200127784
Chromosome Location	chr14:55092773-55092774
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:55092055..55094669-chr14:55116255..55118768,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv974464	chr14:55092217-55152792	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv84119	chr14:55092774-55092781	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:98 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55070400-55116200	Weak transcription	HMEC	breast
2	chr14:55078800-55094000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr14:55078800-55094000	Weak transcription	HSMMtube	muscle
4	chr14:55084600-55103000	Weak transcription	NHEK	skin
5	chr14:55087600-55094000	Enhancers	NHLF	lung
6	chr14:55087600-55094200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr14:55089000-55093600	Enhancers	HepG2	liver
8	chr14:55089200-55094200	Enhancers	Skeletal Muscle Female	skeletal muscle
9	chr14:55089600-55093000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
10	chr14:55089600-55095400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr14:55089800-55094200	Weak transcription	Ovary	ovary
12	chr14:55090000-55093000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
13	chr14:55090000-55093200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
14	chr14:55090000-55093400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr14:55090000-55093800	Weak transcription	Primary B cells from peripheral blood	blood
16	chr14:55090000-55093800	Weak transcription	GM12878-XiMat	blood
17	chr14:55090000-55094000	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr14:55090000-55094200	Weak transcription	Right Ventricle	heart
19	chr14:55090000-55094600	Weak transcription	Fetal Muscle Trunk	muscle
20	chr14:55090200-55094000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr14:55090600-55093000	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr14:55090600-55093600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
23	chr14:55090600-55093800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr14:55090600-55094000	Weak transcription	Brain Anterior Caudate	brain
25	chr14:55090600-55094000	Enhancers	Fetal Lung	lung
26	chr14:55090600-55094200	Weak transcription	Placenta Amnion	Placenta Amnion
27	chr14:55090800-55094400	Enhancers	Cortex derived primary cultured neurospheres	brain
28	chr14:55091000-55092800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
29	chr14:55091000-55092800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr14:55091000-55093800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr14:55091000-55094000	Enhancers	NHDF-Ad	bronchial
32	chr14:55091000-55094400	Enhancers	ES-I3 Cell Line	embryonic stem cell
33	chr14:55091200-55092800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr14:55091200-55093600	Enhancers	Psoas Muscle	Psoas
35	chr14:55091200-55093800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr14:55091200-55094000	Enhancers	Duodenum Smooth Muscle	Duodenum
37	chr14:55091200-55094600	Enhancers	Fetal Heart	heart
38	chr14:55091200-55094800	Enhancers	iPS-15b Cell Line	embryonic stem cell
39	chr14:55091200-55095000	Enhancers	HUES48 Cell Line	embryonic stem cell
40	chr14:55091200-55095000	Enhancers	HUES64 Cell Line	embryonic stem cell
41	chr14:55091200-55095200	Enhancers	HUES6 Cell Line	embryonic stem cell
42	chr14:55091200-55095200	Enhancers	Fetal Stomach	stomach
43	chr14:55091400-55092800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr14:55091400-55093200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr14:55091400-55094000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr14:55091400-55095000	Enhancers	iPS-20b Cell Line	embryonic stem cell
47	chr14:55091600-55094000	Enhancers	Primary hematopoietic stem cells short term culture	blood
48	chr14:55091600-55094000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
49	chr14:55091600-55094200	Enhancers	Adipose Nuclei	Adipose
50	chr14:55091600-55094800	Weak transcription	Brain Germinal Matrix	brain

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