Variant report

Variant	rs200145535
Chromosome Location	chr5:124484390-124484391
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830475	chr5:124387292-124550256	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv599658	chr5:124459547-124513012	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	esv2137795	chr5:124484183-124484620	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
4	esv3490392	chr5:124484310-124484470	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
5	esv3373923	chr5:124484330-124484440	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3490393	chr5:124484340-124484444	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv987579	chr5:124484368-124484419	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv1664242	chr5:124484391-124484443	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124471400-124484600	Weak transcription	HSMM	muscle
2	chr5:124477200-124488200	Weak transcription	HUVEC	blood vessel
3	chr5:124477400-124484600	Weak transcription	Adipose Nuclei	Adipose
4	chr5:124483000-124484600	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr5:124484000-124490800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr5:124484200-124485400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr5:124484200-124485400	Enhancers	NHDF-Ad	bronchial
8	chr5:124484200-124486400	Enhancers	Fetal Stomach	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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