The 2.0 version of rSNPBase

Variant report

Variant rs2001745
Chromosome Location chr11:34217849-34217850
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34203000-34224800 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr11:34203400-34228200 Weak transcription Psoas Muscle Psoas
3 chr11:34207000-34218000 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr11:34207200-34226000 Weak transcription Gastric stomach
5 chr11:34208200-34235200 Weak transcription Adipose Nuclei Adipose
6 chr11:34210600-34224800 Weak transcription Primary T cells from cord blood blood
7 chr11:34210600-34226600 Weak transcription Pancreas Pancrea
8 chr11:34214000-34224400 Weak transcription GM12878-XiMat blood
9 chr11:34214600-34228000 Weak transcription Brain Angular Gyrus brain
10 chr11:34214800-34225200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr11:34215000-34218800 Weak transcription Fetal Thymus thymus
12 chr11:34215000-34219400 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr11:34215000-34223200 Weak transcription Fetal Lung lung
14 chr11:34215000-34228200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr11:34215000-34228400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr11:34215000-34235800 Weak transcription Brain Anterior Caudate brain
17 chr11:34215200-34220000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr11:34215200-34226400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr11:34215200-34226400 Weak transcription Osteobl bone
20 chr11:34215200-34227400 Weak transcription Brain Substantia Nigra brain
21 chr11:34215200-34228200 Weak transcription Duodenum Mucosa Duodenum
22 chr11:34215400-34218800 Weak transcription Esophagus oesophagus
23 chr11:34215600-34218800 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr11:34215600-34224400 Weak transcription NHEK skin
25 chr11:34215600-34225400 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr11:34215600-34228200 Weak transcription Right Atrium heart
27 chr11:34215600-34232600 Weak transcription Fetal Brain Female brain
28 chr11:34215800-34219000 Weak transcription NHDF-Ad bronchial
29 chr11:34215800-34224800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr11:34215800-34225400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr11:34216000-34218200 Weak transcription HSMM muscle
32 chr11:34216000-34224600 Weak transcription Hela-S3 cervix
33 chr11:34216000-34225600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr11:34216000-34228200 Weak transcription Brain Cingulate Gyrus brain
35 chr11:34216200-34219200 Weak transcription Brain Germinal Matrix brain
36 chr11:34216200-34223600 Weak transcription Right Ventricle heart
37 chr11:34216200-34225400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr11:34216200-34226600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr11:34216400-34219000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr11:34216600-34228400 Weak transcription Lung lung
41 chr11:34216800-34219000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:34217000-34218600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr11:34217000-34218800 Strong transcription Stomach Smooth Muscle stomach
44 chr11:34217000-34219000 Strong transcription HSMMtube muscle
45 chr11:34217000-34219600 Strong transcription Liver Liver
46 chr11:34217000-34219800 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr11:34217000-34220000 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr11:34217000-34223200 Weak transcription Fetal Muscle Leg muscle
49 chr11:34217000-34225000 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr11:34217000-34225200 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015