Variant report

Variant	rs200232394
Chromosome Location	chr11:71927881-71927882
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530623	chr11:71088949-72020418	Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases
2	nsv897908	chr11:71927468-71956890	ZNF genes & repeats Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv897909	chr11:71927468-71960554	Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Enhancers Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:71927400-71929600	Enhancers	K562	blood
2	chr11:71927400-71930400	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr11:71927600-71929800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
4	chr11:71927600-71930000	Enhancers	Primary B cells from peripheral blood	blood
5	chr11:71927800-71928000	Bivalent Enhancer	Primary mononuclear cells fromperipheralblood	Blood
6	chr11:71927800-71928000	Enhancers	Pancreas	Pancrea
7	chr11:71927800-71928000	Bivalent/Poised TSS	Skeletal Muscle Female	skeletal muscle
8	chr11:71927800-71928000	Enhancers	Spleen	Spleen
9	chr11:71927800-71928600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr11:71927800-71928600	Active TSS	Duodenum Smooth Muscle	Duodenum
11	chr11:71927800-71929400	Active TSS	Adipose Nuclei	Adipose
12	chr11:71927800-71929600	Bivalent/Poised TSS	Fetal Muscle Leg	muscle
13	chr11:71927800-71929800	Enhancers	Primary B cells from cord blood	blood
14	chr11:71927800-71930000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
15	chr11:71927800-71930000	Active TSS	Placenta	Placenta
16	chr11:71927800-71930400	Enhancers	Primary hematopoietic stem cells short term culture	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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