Variant report

Variant rs2002405
Chromosome Location chr1:161583107-161583108
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161580400-161583200 Active TSS K562 blood
2 chr1:161581000-161583200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr1:161581000-161583200 Active TSS iPS-18 Cell Line embryonic stem cell
4 chr1:161581200-161583200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:161581200-161583200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:161581200-161583200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:161581200-161583200 Active TSS Cortex derived primary cultured neurospheres brain
8 chr1:161581200-161583200 Active TSS A549 lung
9 chr1:161581200-161583400 Active TSS ES-I3 Cell Line embryonic stem cell
10 chr1:161581200-161583400 Active TSS H1 Cell Line embryonic stem cell
11 chr1:161581200-161583400 Active TSS HUES6 Cell Line embryonic stem cell
12 chr1:161581200-161583400 Active TSS HUES64 Cell Line embryonic stem cell
13 chr1:161581200-161583400 Active TSS iPS-20b Cell Line embryonic stem cell
14 chr1:161581200-161583400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:161581400-161583200 Active TSS H9 Cell Line embryonic stem cell
16 chr1:161581400-161583200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:161581400-161583200 Active TSS iPS-15b Cell Line embryonic stem cell
18 chr1:161581400-161583200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
19 chr1:161581400-161583200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
20 chr1:161581400-161583200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:161581400-161583200 Active TSS Brain Angular Gyrus brain
22 chr1:161581400-161583200 Active TSS Brain Anterior Caudate brain
23 chr1:161581400-161583200 Active TSS Brain Inferior Temporal Lobe brain
24 chr1:161581400-161583200 Active TSS Fetal Kidney kidney
25 chr1:161581400-161583200 Active TSS Stomach Smooth Muscle stomach
26 chr1:161581400-161583400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:161581400-161583400 Active TSS Fetal Lung lung
28 chr1:161581400-161583400 Active TSS NHDF-Ad bronchial
29 chr1:161581600-161583200 Active TSS Brain Cingulate Gyrus brain
30 chr1:161581600-161583200 Active TSS Brain Hippocampus Middle brain
31 chr1:161581600-161583200 Active TSS Fetal Adrenal Gland Adrenal Gland
32 chr1:161581600-161583200 Active TSS Fetal Muscle Trunk muscle
33 chr1:161581600-161583200 Active TSS Ovary ovary
34 chr1:161581600-161583200 Active TSS Rectal Smooth Muscle rectum
35 chr1:161581600-161583200 Active TSS HSMMtube muscle
36 chr1:161581600-161583400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:161581800-161583200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
38 chr1:161581800-161583200 Active TSS Fetal Intestine Large intestine
39 chr1:161581800-161583200 Active TSS Hela-S3 cervix
40 chr1:161581800-161583200 Active TSS NH-A brain
41 chr1:161581800-161583400 Active TSS Osteobl bone
42 chr1:161582200-161589800 Weak transcription Lung lung
43 chr1:161582600-161583200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr1:161582600-161583200 Enhancers HMEC breast
45 chr1:161582800-161583200 Enhancers Primary B cells from cord blood blood
46 chr1:161582800-161583200 Enhancers Primary T cells fromperipheralblood blood
47 chr1:161582800-161583200 Enhancers Primary T helper 17 cells PMA-I stimulated --
48 chr1:161582800-161583200 Enhancers Primary T helper cells fromperipheralblood blood
49 chr1:161582800-161583200 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr1:161582800-161583200 Enhancers Primary T killer naive cells fromperipheralblood blood

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