Variant report

Variant	rs200300311
Chromosome Location	chr3:195635005-195635006
allele	-/AT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	HDAC2	chr3:195633738-195635772	MCF-7	breast:	n/a	n/a
2	POLR2A	chr3:195633615-195635701	GM12878	blood:	n/a	n/a
3	MXI1	chr3:195634465-195637159	SK-N-SH	brain:	n/a	chr3:195635673-195635682 chr3:195634896-195634905
4	TEAD4	chr3:195634654-195635470	K562	blood:	n/a	n/a
5	USF2	chr3:195633730-195635453	GM12878	blood:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910
6	EBF1	chr3:195633572-195635035	GM12878	blood:	n/a	n/a
7	E2F6	chr3:195634713-195635543	K562	blood:	n/a	n/a
8	POLR2A	chr3:195634892-195635253	HepG2	liver:	n/a	n/a
9	MYC	chr3:195634657-195635420	K562	blood:	n/a	chr3:195634895-195634904
10	POLR2A	chr3:195634478-195635357	GM12878	blood:	n/a	n/a
11	GATA3	chr3:195633854-195635601	MCF-7	breast:	n/a	chr3:195634918-195634925 chr3:195634778-195634791 chr3:195634297-195634306
12	MAX	chr3:195634661-195635313	K562	blood:	n/a	chr3:195634895-195634904
13	MAX	chr3:195632889-195635444	GM12878	blood:	n/a	chr3:195634895-195634904
14	POLR2A	chr3:195633042-195635567	GM12878	blood:	n/a	n/a
15	WRNIP1	chr3:195633616-195635007	GM12878	blood:	n/a	n/a
16	SIN3A	chr3:195634618-195635629	H1-hESC	embryonic stem cell:	n/a	chr3:195634894-195634903 chr3:195634896-195634905
17	HDAC2	chr3:195634640-195635252	K562	blood:	n/a	n/a
18	BHLHE40	chr3:195634693-195635060	HepG2	liver:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910
19	USF1	chr3:195634675-195635107	GM12878	blood:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
20	MAX	chr3:195634688-195635403	K562	blood:	n/a	chr3:195634895-195634904
21	CTCF	chr3:195634940-195635090	GM12872	blood:	n/a	n/a
22	POLR2A	chr3:195632976-195635069	GM12878	blood:	n/a	n/a
23	NFIC	chr3:195634416-195635491	ECC-1	luminal epithelium:	n/a	n/a
24	POLR2A	chr3:195633549-195635535	GM12892	blood:	n/a	n/a
25	USF1	chr3:195634783-195635020	HepG2	liver:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
26	MYC	chr3:195634942-195635104	GM12878	blood:	n/a	n/a
27	TCF12	chr3:195634544-195635492	ECC-1	luminal epithelium:	n/a	n/a
28	USF1	chr3:195634663-195635170	SK-N-SH	brain:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
29	USF1	chr3:195634561-195635344	HCT-116	colon:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
30	FOXM1	chr3:195633869-195635124	MCF-7	breast:	n/a	n/a
31	MAX	chr3:195634726-195635026	HepG2	liver:	n/a	chr3:195634895-195634904
32	CTCF	chr3:195634900-195635050	GM12874	blood:	n/a	n/a
33	ELF1	chr3:195633697-195635589	MCF-7	breast:	n/a	n/a
34	KAP1	chr3:195634520-195635508	HEK293	kidney:	n/a	n/a
35	BHLHE40	chr3:195632762-195635654	GM12878	blood:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910
36	USF1	chr3:195634661-195635171	GM12878	blood:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
37	MAX	chr3:195633785-195635632	MCF-7	breast:	n/a	chr3:195634895-195634904
38	POLR2A	chr3:195632833-195635385	GM12878	blood:	n/a	n/a
39	USF1	chr3:195634614-195635606	ECC-1	luminal epithelium:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
40	NFIC	chr3:195634644-195635168	GM12878	blood:	n/a	n/a
41	USF1	chr3:195634645-195635088	SK-N-SH_RA	brain:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
42	POLR2A	chr3:195634073-195635460	PBDE	blood:	n/a	n/a
43	POLR2A	chr3:195633232-195635540	GM15510	blood:	n/a	n/a
44	MAX	chr3:195634575-195636997	ECC-1	luminal epithelium:	n/a	chr3:195634895-195634904
45	STAT5A	chr3:195633584-195635085	GM12878	blood:	n/a	chr3:195633739-195633747 chr3:195634373-195634385
46	MAZ	chr3:195633612-195635296	GM12878	blood:	n/a	chr3:195634895-195634904
47	POLR2A	chr3:195634778-195635063	MCF-7	breast:	n/a	n/a
48	USF1	chr3:195634653-195635064	SK-N-SH_RA	brain:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
49	USF1	chr3:195634692-195635059	H1-hESC	embryonic stem cell:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
50	PAX5	chr3:195634534-195635170	GM12878	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:195634965-195635015	Hepatocyte	liver:	n/a
2	chr3:195634965-195635015	AG09319	gingival:	n/a
3	chr3:195634965-195635015	H1-hESC	embryonic stem cell:	embryo
4	chr3:195634965-195635015	BE2_C	brain:	n/a
5	chr3:195634965-195635015	HRE	kidney:	n/a
6	chr3:195634965-195635015	HL-60	blood:	n/a
7	chr3:195634965-195635015	HEEpiC	esophagus:	n/a
8	chr3:195634965-195635015	HNPCEpiC	eye:	n/a
9	chr3:195634965-195635015	AG10803	skin:	n/a
10	chr3:195634965-195635015	NT2-D1	testis:	n/a
11	chr3:195634965-195635015	HCF	heart:	n/a
12	chr3:195634965-195635015	SK-N-MC	brain:	n/a
13	chr3:195634965-195635015	Hela-S3	cervix:	n/a
14	chr3:195634965-195635015	HepG2	liver:	n/a
15	chr3:195634965-195635015	CMK	blood:	n/a
16	chr3:195634965-195635015	SAEC	small airway:	n/a
17	chr3:195634965-195635015	ProgFib	skin:	n/a
18	chr3:195634965-195635015	HIPEpiC	eye:	n/a
19	chr3:195634965-195635015	HMEC	breast:	n/a
20	chr3:195634965-195635015	Jurkat	blood:	n/a
21	chr3:195634965-195635015	AoSMC	blood vessel:	n/a
22	chr3:195634965-195635015	HRCEpiC	kidney:	n/a
23	chr3:195634965-195635015	PFSK-1	brain:	n/a
24	chr3:195634965-195635015	MCF10A-Er-Src	breast:	n/a
25	chr3:195634965-195635015	PrEC	prostate:	n/a
26	chr3:195634965-195635015	SK-N-SH_RA	brain:	n/a
27	chr3:195634965-195635015	A549	lung:	n/a
28	chr3:195634965-195635015	HUVEC	blood vessel:	n/a
29	chr3:195634965-195635015	HEK293	kidney:	embryo
30	chr3:195634965-195635015	HAEpiC	amniotic membrane:	n/a
31	chr3:195634965-195635015	ECC-1	luminal epithelium:	n/a
32	chr3:195634965-195635015	K562	blood:	n/a
33	chr3:195634965-195635015	HRPEpiC	eye:	n/a
34	chr3:195634965-195635015	GM06990	blood:	n/a
35	chr3:195634965-195635015	RPTEC	kidney:	n/a
36	chr3:195634965-195635015	GM19239	blood:	n/a
37	chr3:195634965-195635015	U87	brain:	n/a
38	chr3:195634965-195635015	NHBE	bronchial:	n/a
39	chr3:195634965-195635015	HPAEpiC	pulmonary alveolar:	n/a
40	chr3:195634965-195635015	MCF-7	breast:	n/a
41	chr3:195634965-195635015	IMR90	lung:	fetal
42	chr3:195634965-195635015	GM12891	blood:	n/a
43	chr3:195634965-195635015	AG09309	skin:	n/a
44	chr3:195634965-195635015	HCT-116	colon:	n/a
45	chr3:195634965-195635015	AG04450	lung:	fetal
46	chr3:195634965-195635015	SK-N-SH	brain:	n/a
47	chr3:195634965-195635015	AG04449	skin:	fetal
48	chr3:195634965-195635015	GM12878	blood:	n/a
49	chr3:195634965-195635015	T-47D	breast:	n/a
50	chr3:195634965-195635015	SKMC	muscle:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:195409239..195411118-chr3:195634886..195637681,2	K562	blood:
2	chr3:195602309..195605964-chr3:195633937..195639111,7	MCF-7	breast:
3	chr3:195634985..195639388-chr3:195640414..195643668,6	K562	blood:
4	chr3:195586183..195589245-chr3:195634778..195636892,3	MCF-7	breast:
5	chr3:195601233..195610120-chr3:195632410..195638442,11	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MUC20-3	chr3:195634947-195635649	ENSG00000224614

Variant related genes	Relation type
ENSG00000226155	TF binding region
ENSG00000226155	CpG island
ENSG00000061938	Chromatin interaction
ENSG00000242086	Chromatin interaction
ENSG00000273009	Chromatin interaction
ENSG00000223783	Chromatin interaction

Extended variants
information (count: 34 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:34 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2759213	chr3:195102787-196071593	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
2	nsv1001387	chr3:195186128-195661538	Bivalent Enhancer Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	49 gene(s)	inside rSNPs	diseases
3	nsv428102	chr3:195201080-195829426	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
4	nsv428430	chr3:195201080-195829426	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
5	nsv1006217	chr3:195312401-195643229	Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
6	nsv536882	chr3:195312401-195643229	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
7	esv2757913	chr3:195379484-196071593	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
8	nsv1006165	chr3:195383130-195777211	Bivalent Enhancer Weak transcription Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
9	nsv471621	chr3:195417664-195795474	Flanking Active TSS Strong transcription Genic enhancers Weak transcription Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
10	esv2751988	chr3:195433543-195651349	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
11	esv2756651	chr3:195433543-195696720	Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
12	nsv432528	chr3:195433543-195696720	Enhancers Strong transcription ZNF genes & repeats Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
13	esv2754016	chr3:195433543-195753766	Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
14	nsv822410	chr3:195438740-195725565	Flanking Active TSS Strong transcription Enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	30 gene(s)	inside rSNPs	diseases
15	nsv878162	chr3:195475989-195641908	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
16	nsv878163	chr3:195477791-195641908	Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
17	nsv997893	chr3:195501392-195642192	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
18	nsv1005193	chr3:195526571-195709662	Strong transcription Weak transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
19	nsv878167	chr3:195550366-195637439	Enhancers Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
20	nsv878168	chr3:195553259-195644332	Transcr. at gene 5' and 3' Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
21	nsv1002591	chr3:195564086-195643229	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
22	nsv530397	chr3:195565159-195740416	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
23	nsv593056	chr3:195571024-195656731	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
24	nsv1007235	chr3:195582468-195651911	Bivalent Enhancer Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
25	nsv1002629	chr3:195582468-195769275	Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
26	esv1811906	chr3:195598137-195637469	Active TSS Genic enhancers Flanking Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases
27	nsv1014602	chr3:195606770-195661538	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
28	nsv829827	chr3:195608866-195760829	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
29	nsv469518	chr3:195623722-195795474	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
30	nsv482784	chr3:195623722-195795474	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
31	nsv1011404	chr3:195627654-195656614	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
32	esv1797272	chr3:195628636-195636469	Flanking Active TSS Active TSS Enhancers Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
33	esv1803975	chr3:195628636-195636469	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
34	nsv593057	chr3:195633438-195636469	Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:195632400-195635400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
2	chr3:195632600-195637200	Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr3:195632800-195635400	Flanking Active TSS	NHEK	skin
4	chr3:195632800-195635600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
5	chr3:195632800-195635600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr3:195632800-195635600	Flanking Active TSS	Duodenum Mucosa	Duodenum
7	chr3:195632800-195635800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
8	chr3:195632800-195635800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr3:195633000-195635200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr3:195633000-195635400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr3:195633000-195635400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
12	chr3:195633000-195635600	Flanking Active TSS	Liver	Liver
13	chr3:195633000-195636000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr3:195633000-195636000	Flanking Active TSS	Dnd41	blood
15	chr3:195633200-195635400	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
16	chr3:195633200-195635400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
17	chr3:195633200-195635400	Flanking Active TSS	Primary B cells from peripheral blood	blood
18	chr3:195633200-195635400	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr3:195633200-195635400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
20	chr3:195633200-195635400	Flanking Active TSS	Fetal Thymus	thymus
21	chr3:195633200-195635400	Flanking Active TSS	NHDF-Ad	bronchial
22	chr3:195633200-195635600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
23	chr3:195633200-195635600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
24	chr3:195633200-195635600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
25	chr3:195633200-195635600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr3:195633200-195635600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
27	chr3:195633200-195635600	Flanking Active TSS	Osteobl	bone
28	chr3:195633200-195635800	Flanking Active TSS	Primary B cells from cord blood	blood
29	chr3:195633200-195635800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
30	chr3:195633200-195636200	Flanking Active TSS	Primary hematopoietic stem cells	blood
31	chr3:195633400-195635600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
32	chr3:195633400-195635600	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
33	chr3:195633400-195635600	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
34	chr3:195633400-195635800	Enhancers	Fetal Brain Male	brain
35	chr3:195633400-195635800	Enhancers	Fetal Heart	heart
36	chr3:195633600-195635200	Flanking Active TSS	Brain Cingulate Gyrus	brain
37	chr3:195633600-195635200	Flanking Active TSS	Brain Hippocampus Middle	brain
38	chr3:195633600-195635400	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr3:195633600-195635400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr3:195633600-195636000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr3:195633600-195636000	Flanking Active TSS	Adipose Nuclei	Adipose
42	chr3:195633600-195636000	Flanking Active TSS	Stomach Smooth Muscle	stomach
43	chr3:195633800-195635200	Flanking Active TSS	Brain Substantia Nigra	brain
44	chr3:195633800-195635400	Flanking Active TSS	Brain Angular Gyrus	brain
45	chr3:195633800-195635400	Flanking Active TSS	Brain Anterior Caudate	brain
46	chr3:195633800-195635400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
47	chr3:195633800-195635400	Flanking Active TSS	HSMMtube	muscle
48	chr3:195633800-195635600	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
49	chr3:195633800-195635800	Flanking Active TSS	Placenta	Placenta
50	chr3:195634000-195635200	Flanking Active TSS	Primary T cells from cord blood	blood

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