Variant report

Variant	rs200361210
Chromosome Location	chr16:69854405-69854406
allele	-/CCAAAGTGT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:69848424..69850083-chr16:69853504..69855055,2	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv906823	chr16:69711533-69959223	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
2	esv3314058	chr16:69854194-69858940	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1062171	chr16:69854267-70188585	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
4	nsv542941	chr16:69854267-70188585	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
5	esv3314059	chr16:69854332-69858806	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:69807200-69854800	Weak transcription	Psoas Muscle	Psoas
2	chr16:69817800-69854600	Weak transcription	HMEC	breast
3	chr16:69822400-69854800	Weak transcription	Stomach Mucosa	stomach
4	chr16:69823800-69874800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr16:69830200-69856600	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr16:69830600-69857600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr16:69830600-69864200	Weak transcription	Colon Smooth Muscle	Colon
8	chr16:69830600-69867000	Weak transcription	Right Ventricle	heart
9	chr16:69831000-69854800	Weak transcription	Aorta	Aorta
10	chr16:69831000-69856400	Strong transcription	Primary monocytes fromperipheralblood	blood
11	chr16:69832400-69858400	Strong transcription	Primary neutrophils fromperipheralblood	blood
12	chr16:69833200-69854800	Weak transcription	NH-A	brain
13	chr16:69833400-69854600	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr16:69833400-69854600	Weak transcription	NHLF	lung
15	chr16:69833800-69854600	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr16:69833800-69854800	Weak transcription	HSMM	muscle
17	chr16:69833800-69854800	Weak transcription	HSMMtube	muscle
18	chr16:69833800-69857600	Weak transcription	Small Intestine	intestine
19	chr16:69833800-69864400	Weak transcription	Rectal Smooth Muscle	rectum
20	chr16:69833800-69874600	Weak transcription	Dnd41	blood
21	chr16:69833800-69875600	Weak transcription	NHEK	skin
22	chr16:69834000-69855000	Weak transcription	Brain Germinal Matrix	brain
23	chr16:69834000-69910600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
24	chr16:69834200-69857800	Weak transcription	Left Ventricle	heart
25	chr16:69834200-69892200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
26	chr16:69834400-69854800	Weak transcription	Brain Angular Gyrus	brain
27	chr16:69834400-69854800	Weak transcription	Duodenum Smooth Muscle	Duodenum
28	chr16:69836400-69867400	Weak transcription	Colonic Mucosa	Colon
29	chr16:69836800-69864200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr16:69836800-69864400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr16:69837000-69905600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
32	chr16:69837800-69864600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr16:69838600-69873000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
34	chr16:69838800-69864400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr16:69838800-69874400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr16:69839200-69854600	Weak transcription	Fetal Heart	heart
37	chr16:69839400-69854600	Weak transcription	NHDF-Ad	bronchial
38	chr16:69839400-69854800	Weak transcription	Fetal Muscle Trunk	muscle
39	chr16:69842000-69857200	Weak transcription	GM12878-XiMat	blood
40	chr16:69843400-69854800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
41	chr16:69844000-69854600	Weak transcription	Brain Substantia Nigra	brain
42	chr16:69844200-69854600	Weak transcription	Brain Anterior Caudate	brain
43	chr16:69844200-69854600	Weak transcription	Brain Hippocampus Middle	brain
44	chr16:69844200-69854600	Weak transcription	Brain Inferior Temporal Lobe	brain
45	chr16:69844200-69855000	Weak transcription	Right Atrium	heart
46	chr16:69844200-69855400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
47	chr16:69844200-69863000	Weak transcription	Esophagus	oesophagus
48	chr16:69844400-69854600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr16:69846000-69854600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr16:69846600-69874400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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