Variant report

Variant	rs200361928
Chromosome Location	chr14:65137986-65137987
allele	-/AT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:65135349..65138709-chr14:65145103..65149484,4	MCF-7	breast:
2	chr14:65137982..65138853-chr14:65229263..65230220,2	MCF-7	breast:
3	chr14:64973577..64975906-chr14:65136944..65139422,2	MCF-7	breast:
4	chr14:65128230..65131121-chr14:65136317..65138576,2	K562	blood:
5	chr14:65137892..65138874-chr14:65266647..65267635,2	MCF-7	breast:
6	chr14:65137874..65140791-chr14:65142432..65144848,2	K562	blood:
7	chr14:65137937..65138882-chr14:65212182..65213063,6	MCF-7	breast:
8	chr14:65137974..65138524-chr14:65212266..65213004,2	MCF-7	breast:
9	chr14:64969252..64972831-chr14:65136872..65138614,3	K562	blood:
10	chr14:65137759..65138752-chr14:65228203..65228779,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049097	chr14:65027753-65202018	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
2	esv3443734	chr14:65137049-65139247	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65127600-65139800	Weak transcription	Esophagus	oesophagus
2	chr14:65130400-65138600	Weak transcription	HMEC	breast
3	chr14:65130400-65139800	Weak transcription	Fetal Muscle Leg	muscle
4	chr14:65130600-65139600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr14:65133400-65139800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr14:65134000-65138400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr14:65134000-65140200	Weak transcription	Duodenum Mucosa	Duodenum
8	chr14:65135400-65149200	Weak transcription	Aorta	Aorta
9	chr14:65136200-65138200	Weak transcription	Fetal Intestine Small	intestine
10	chr14:65136200-65138400	Weak transcription	Stomach Mucosa	stomach
11	chr14:65136200-65138600	Weak transcription	A549	lung
12	chr14:65137200-65139000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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