The 2.0 version of rSNPBase

Variant report

Variant rs200474523
Chromosome Location chr10:18454025-18454026
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:18431400-18468800 Weak transcription Brain Cingulate Gyrus brain
2 chr10:18435000-18454200 Weak transcription Brain Anterior Caudate brain
3 chr10:18435000-18467200 Weak transcription Brain Hippocampus Middle brain
4 chr10:18443800-18459000 Weak transcription Fetal Intestine Small intestine
5 chr10:18444600-18456000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr10:18444600-18457000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr10:18444600-18458400 Weak transcription Primary hematopoietic stem cells blood
8 chr10:18444600-18466800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr10:18448400-18454200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr10:18448400-18469000 Weak transcription Right Ventricle heart
11 chr10:18448600-18454200 Weak transcription Aorta Aorta
12 chr10:18452400-18454600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
13 chr10:18452400-18454600 Enhancers Ovary ovary
14 chr10:18452400-18456000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr10:18452600-18454600 Enhancers Fetal Lung lung
16 chr10:18452600-18454600 Enhancers Fetal Stomach stomach
17 chr10:18452800-18454600 Enhancers Osteobl bone
18 chr10:18452800-18466600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr10:18453000-18454200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr10:18453000-18454200 Weak transcription Pancreas Pancrea
21 chr10:18453000-18459600 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr10:18453200-18454200 Weak transcription Colon Smooth Muscle Colon
23 chr10:18453200-18454600 Enhancers Muscle Satellite Cultured Cells --
24 chr10:18453200-18454600 Enhancers Fetal Muscle Leg muscle
25 chr10:18453400-18454200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr10:18453400-18454200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
27 chr10:18453400-18454200 Weak transcription HSMM muscle
28 chr10:18453400-18458600 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr10:18453600-18454200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr10:18453600-18454400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr10:18453600-18454400 Enhancers Fetal Brain Male brain
32 chr10:18453800-18454200 Active TSS Stomach Smooth Muscle stomach
33 chr10:18453800-18454600 Enhancers Fetal Brain Female brain
34 chr10:18453800-18454800 Enhancers NHDF-Ad bronchial
35 chr10:18453800-18465000 Weak transcription Fetal Heart heart
36 chr10:18454000-18454200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
37 chr10:18454000-18454400 Flanking Active TSS Rectal Smooth Muscle rectum
38 chr10:18454000-18454400 Flanking Active TSS NHLF lung
39 chr10:18454000-18454600 Enhancers Left Ventricle heart
40 chr10:18454000-18454600 Enhancers Sigmoid Colon Sigmoid Colon
41 chr10:18454000-18454600 Flanking Active TSS NH-A brain

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Last update: Aug 31, 2015