Variant report

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831627	chr9:78651134-78817669	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv869152	chr9:78742197-79583399	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
3	nsv982623	chr9:78752088-78754899	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
4	esv1656329	chr9:78752800-78752801	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:78688000-78774000	Weak transcription	Left Ventricle	heart
2	chr9:78724000-78767000	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr9:78725400-78766400	Weak transcription	Thymus	Thymus
4	chr9:78730200-78755000	Weak transcription	Aorta	Aorta
5	chr9:78745200-78753000	Weak transcription	Fetal Thymus	thymus
6	chr9:78745400-78758800	Weak transcription	Primary T cells from cord blood	blood
7	chr9:78748400-78769200	Weak transcription	Duodenum Mucosa	Duodenum
8	chr9:78750600-78753000	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr9:78750600-78753600	Enhancers	Ovary	ovary
10	chr9:78750800-78753200	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr9:78751600-78773200	Weak transcription	Fetal Stomach	stomach
12	chr9:78751800-78753000	Enhancers	HUVEC	blood vessel
13	chr9:78751800-78753600	Enhancers	NHLF	lung
14	chr9:78751800-78753800	Enhancers	Fetal Lung	lung
15	chr9:78752000-78753000	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr9:78752200-78754400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr9:78752200-78772000	Weak transcription	Fetal Intestine Large	intestine
18	chr9:78752400-78773400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr9:78752600-78753600	Enhancers	Rectal Mucosa Donor 31	rectum
20	chr9:78752800-78753600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr9:78752800-78753600	Strong transcription	Fetal Intestine Small	intestine

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