| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1058524 |
chr20:821434-1254865 |
Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
23 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv544138 |
chr20:821434-1254865 |
Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
23 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1057939 |
chr20:824980-1316778 |
Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
34 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1057097 |
chr20:1030940-1314265 |
Active TSS Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
27 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv912586 |
chr20:1195784-1248286 |
Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv518957 |
chr20:1195784-1250463 |
Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv912587 |
chr20:1205886-1248286 |
Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
esv1816838 |
chr20:1230185-1247015 |
Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv585195 |
chr20:1234243-1240933 |
Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv585196 |
chr20:1234390-1240623 |
Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
esv21397 |
chr20:1238750-1241117 |
Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv585197 |
chr20:1239505-1240993 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
nsv585198 |
chr20:1239505-1243052 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 14 |
nsv585199 |
chr20:1239618-1240867 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 15 |
nsv585200 |
chr20:1239618-1240993 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page:
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