Variant report

Variant rs200557872
Chromosome Location chr1:145277092-145277093
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145264600-145277200 Weak transcription Fetal Brain Male brain
2 chr1:145265200-145277200 Weak transcription Brain Angular Gyrus brain
3 chr1:145272000-145277200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:145272000-145277200 Weak transcription Psoas Muscle Psoas
5 chr1:145272000-145277200 Weak transcription Right Atrium heart
6 chr1:145273200-145277200 Strong transcription Primary B cells from peripheral blood blood
7 chr1:145273200-145277200 Strong transcription Primary T cells fromperipheralblood blood
8 chr1:145273200-145277200 Strong transcription Primary T helper naive cells fromperipheralblood blood
9 chr1:145273200-145277200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:145273200-145277200 Strong transcription Fetal Muscle Trunk muscle
11 chr1:145273200-145277200 Strong transcription Fetal Thymus thymus
12 chr1:145273200-145277200 Strong transcription Skeletal Muscle Female skeletal muscle
13 chr1:145273200-145277200 Strong transcription HSMMtube muscle
14 chr1:145273200-145278000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:145273200-145281400 Strong transcription Osteobl bone
16 chr1:145273600-145277200 Weak transcription Brain Cingulate Gyrus brain
17 chr1:145273800-145277200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr1:145273800-145277200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr1:145273800-145277200 Strong transcription Ovary ovary
20 chr1:145274000-145277200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:145276000-145277200 Strong transcription NHDF-Ad bronchial
22 chr1:145276200-145277200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:145276200-145278000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
24 chr1:145276400-145278600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:145277000-145277400 ZNF genes & repeats Fetal Kidney kidney
26 chr1:145277000-145277400 ZNF genes & repeats Placenta Amnion Placenta Amnion
27 chr1:145277000-145277600 ZNF genes & repeats H1 Cell Line embryonic stem cell
28 chr1:145277000-145277600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:145277000-145277600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:145277000-145277600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
31 chr1:145277000-145277600 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
32 chr1:145277000-145277600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
33 chr1:145277000-145277600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:145277000-145277600 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
35 chr1:145277000-145277600 ZNF genes & repeats Primary T cells from cord blood blood
36 chr1:145277000-145277600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
37 chr1:145277000-145277600 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
38 chr1:145277000-145277600 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:145277000-145277600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:145277000-145277600 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
41 chr1:145277000-145277600 ZNF genes & repeats Aorta Aorta
42 chr1:145277000-145277600 ZNF genes & repeats Brain Anterior Caudate brain
43 chr1:145277000-145277600 ZNF genes & repeats Brain Germinal Matrix brain
44 chr1:145277000-145277600 ZNF genes & repeats Brain Substantia Nigra brain
45 chr1:145277000-145277600 ZNF genes & repeats Colonic Mucosa Colon
46 chr1:145277000-145277600 ZNF genes & repeats Colon Smooth Muscle Colon
47 chr1:145277000-145277600 ZNF genes & repeats Fetal Brain Female brain
48 chr1:145277000-145277600 ZNF genes & repeats Fetal Heart heart
49 chr1:145277000-145277600 ZNF genes & repeats Gastric stomach
50 chr1:145277000-145277600 ZNF genes & repeats Left Ventricle heart

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