Variant report

Variant	rs200561436
Chromosome Location	chr10:91547288-91547289
allele	-/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046241	chr10:91478562-91614437	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv869080	chr10:91498641-91712834	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv1036581	chr10:91526705-91691536	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
4	nsv948132	chr10:91546180-91550682	Weak transcription Bivalent Enhancer Enhancers Active TSS	n/a	n/a	inside rSNPs	n/a
5	esv2641331	chr10:91546557-91547974	Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a
6	esv3337343	chr10:91546722-91549420	Enhancers Weak transcription Bivalent Enhancer Active TSS	n/a	n/a	inside rSNPs	n/a
7	esv5792	chr10:91547152-91547983	Weak transcription	n/a	n/a	inside rSNPs	n/a
8	esv2353683	chr10:91547200-91547915	Weak transcription	n/a	n/a	inside rSNPs	n/a
9	esv3319740	chr10:91547279-91547822	Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv3508409	chr10:91547280-91547848	Weak transcription	n/a	n/a	inside rSNPs	n/a
11	esv3319752	chr10:91547289-91547827	Weak transcription	n/a	n/a	inside rSNPs	n/a
12	esv3508407	chr10:91547289-91547830	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91506400-91549000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr10:91506600-91554200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr10:91523000-91549400	Weak transcription	Adipose Nuclei	Adipose
4	chr10:91523400-91549000	Weak transcription	K562	blood
5	chr10:91529600-91549000	Weak transcription	Primary T cells fromperipheralblood	blood
6	chr10:91533200-91554400	Weak transcription	NHEK	skin
7	chr10:91540600-91554200	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr10:91540800-91549600	Weak transcription	Lung	lung
9	chr10:91540800-91554000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr10:91541000-91548800	Weak transcription	Dnd41	blood
11	chr10:91541000-91549000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr10:91541200-91549000	Weak transcription	Primary hematopoietic stem cells	blood
13	chr10:91541200-91549200	Weak transcription	Fetal Muscle Trunk	muscle
14	chr10:91541200-91552000	Weak transcription	HMEC	breast
15	chr10:91541200-91554800	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr10:91541400-91547800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr10:91541400-91548800	Weak transcription	Primary T cells from cord blood	blood
18	chr10:91541400-91549000	Weak transcription	Fetal Thymus	thymus
19	chr10:91541400-91549200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr10:91541400-91550200	Weak transcription	Fetal Intestine Small	intestine
21	chr10:91541400-91560000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
22	chr10:91541600-91549000	Weak transcription	Thymus	Thymus
23	chr10:91541600-91552200	Weak transcription	Hela-S3	cervix
24	chr10:91541600-91554000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr10:91542600-91554000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
26	chr10:91544400-91549000	Weak transcription	HUES6 Cell Line	embryonic stem cell
27	chr10:91544600-91554000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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