The 2.0 version of rSNPBase

Variant report

Variant rs2006980
Chromosome Location chr2:191233252-191233253
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191211400-191238000 Weak transcription Hela-S3 cervix
2 chr2:191219400-191234000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr2:191219600-191243800 Weak transcription Gastric stomach
4 chr2:191223800-191236800 Weak transcription Psoas Muscle Psoas
5 chr2:191224000-191235600 Weak transcription Spleen Spleen
6 chr2:191224800-191236200 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr2:191225000-191234200 Weak transcription Right Ventricle heart
8 chr2:191225000-191235600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr2:191225000-191235600 Weak transcription Pancreas Pancrea
10 chr2:191225000-191236400 Strong transcription Primary monocytes fromperipheralblood blood
11 chr2:191225000-191237400 Weak transcription Fetal Brain Female brain
12 chr2:191225000-191237600 Weak transcription Small Intestine intestine
13 chr2:191225000-191242800 Weak transcription Placenta Placenta
14 chr2:191225200-191233400 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr2:191225200-191233800 Weak transcription NHLF lung
16 chr2:191225200-191234400 Weak transcription K562 blood
17 chr2:191225200-191235200 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr2:191225200-191235200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:191225200-191235600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr2:191225200-191235600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr2:191225200-191235600 Weak transcription Colonic Mucosa Colon
22 chr2:191225200-191235800 Weak transcription Primary hematopoietic stem cells blood
23 chr2:191225200-191235800 Weak transcription Brain Germinal Matrix brain
24 chr2:191225200-191236200 Strong transcription Rectal Mucosa Donor 31 rectum
25 chr2:191225200-191236400 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr2:191225200-191236600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr2:191225200-191236600 Weak transcription NH-A brain
28 chr2:191225200-191237000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr2:191225200-191237000 Weak transcription Stomach Mucosa stomach
30 chr2:191225200-191237000 Weak transcription HMEC breast
31 chr2:191225200-191237200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr2:191225200-191237200 Weak transcription Placenta Amnion Placenta Amnion
33 chr2:191225200-191238200 Weak transcription NHEK skin
34 chr2:191225200-191242800 Weak transcription Fetal Kidney kidney
35 chr2:191225200-191244000 Weak transcription Fetal Heart heart
36 chr2:191225200-191244800 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr2:191225400-191236200 Strong transcription Fetal Adrenal Gland Adrenal Gland
38 chr2:191225400-191237200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr2:191225400-191239200 Weak transcription Muscle Satellite Cultured Cells --
40 chr2:191225800-191234000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr2:191226000-191237000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr2:191226400-191236000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr2:191226600-191235400 Weak transcription Primary T cells from cord blood blood
44 chr2:191226600-191237000 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr2:191226600-191237000 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr2:191226600-191237800 Weak transcription GM12878-XiMat blood
47 chr2:191226800-191236400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr2:191227000-191233800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr2:191227000-191236000 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr2:191227200-191236600 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015