Variant report

Variant rs200771983
Chromosome Location chr6:32053748-32053749
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32038200-32055000 Weak transcription Left Ventricle heart
2 chr6:32041400-32054200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr6:32046800-32054200 Genic enhancers Fetal Muscle Trunk muscle
4 chr6:32049400-32059600 Weak transcription Aorta Aorta
5 chr6:32050800-32055000 Weak transcription Right Atrium heart
6 chr6:32051200-32054200 Weak transcription Pancreas Pancrea
7 chr6:32051400-32054000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr6:32051400-32054000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr6:32051400-32054200 Weak transcription Esophagus oesophagus
10 chr6:32051600-32054000 Enhancers Placenta Amnion Placenta Amnion
11 chr6:32052000-32054400 Weak transcription Right Ventricle heart
12 chr6:32052200-32054000 Weak transcription NHDF-Ad bronchial
13 chr6:32052200-32054200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr6:32052200-32054400 Strong transcription Fetal Muscle Leg muscle
15 chr6:32052200-32056400 Bivalent Enhancer Placenta Placenta
16 chr6:32052400-32053800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr6:32052400-32053800 Weak transcription Ovary ovary
18 chr6:32052400-32054200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr6:32052600-32053800 Weak transcription Hela-S3 cervix
20 chr6:32052600-32053800 Weak transcription K562 blood
21 chr6:32052600-32054600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
22 chr6:32052800-32054800 Weak transcription Lung lung
23 chr6:32053000-32054200 Weak transcription Brain Anterior Caudate brain
24 chr6:32053000-32054200 Weak transcription Spleen Spleen
25 chr6:32053200-32053800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
26 chr6:32053200-32054200 Weak transcription Adipose Nuclei Adipose
27 chr6:32053200-32054200 Enhancers Fetal Intestine Small intestine
28 chr6:32053200-32054800 Bivalent Enhancer Stomach Smooth Muscle stomach
29 chr6:32053200-32055000 Enhancers Duodenum Mucosa Duodenum
30 chr6:32053400-32054400 Enhancers Fetal Intestine Large intestine
31 chr6:32053400-32055400 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr6:32053600-32053800 Flanking Active TSS Colonic Mucosa Colon
33 chr6:32053600-32053800 Weak transcription Gastric stomach
34 chr6:32053600-32054200 Bivalent Enhancer HepG2 liver
35 chr6:32053600-32055000 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr6:32053600-32055000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
37 chr6:32053600-32055400 Enhancers GM12878-XiMat blood
38 chr6:32053600-32055800 Enhancers NHLF lung
39 chr6:32053600-32056800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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