Variant report

Variant rs200805592
Chromosome Location chr3:49198500-49198501
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49172200-49200400 Weak transcription Colon Smooth Muscle Colon
2 chr3:49186200-49198800 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr3:49186800-49198800 Weak transcription Pancreas Pancrea
4 chr3:49191000-49198800 Weak transcription Ovary ovary
5 chr3:49191000-49199800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr3:49191400-49198800 Weak transcription Gastric stomach
7 chr3:49191400-49199000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr3:49191600-49200200 Weak transcription Esophagus oesophagus
9 chr3:49192200-49198600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr3:49194400-49199000 Weak transcription Placenta Amnion Placenta Amnion
11 chr3:49194600-49198800 Weak transcription Stomach Smooth Muscle stomach
12 chr3:49195000-49199600 Weak transcription Rectal Smooth Muscle rectum
13 chr3:49195200-49199400 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr3:49195200-49200400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr3:49195200-49202400 Weak transcription Fetal Kidney kidney
16 chr3:49195400-49198800 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr3:49195400-49200400 Weak transcription Brain Angular Gyrus brain
18 chr3:49195600-49198600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr3:49195600-49198600 Weak transcription Fetal Muscle Leg muscle
20 chr3:49195600-49198800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr3:49195600-49198800 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr3:49195600-49198800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr3:49195600-49199000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr3:49195600-49199400 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr3:49195600-49199400 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr3:49195600-49200200 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr3:49195600-49200200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr3:49195600-49200400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr3:49195600-49200400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr3:49195600-49200400 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr3:49195600-49200400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr3:49195600-49202200 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr3:49195800-49198800 Weak transcription Fetal Intestine Large intestine
34 chr3:49195800-49199600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr3:49196000-49202400 Strong transcription Fetal Stomach stomach
36 chr3:49196200-49200200 Weak transcription Fetal Lung lung
37 chr3:49196400-49198800 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr3:49196400-49199200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr3:49196400-49200400 Weak transcription HepG2 liver
40 chr3:49196400-49202200 Weak transcription Right Atrium heart
41 chr3:49196600-49198600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr3:49196600-49198600 Weak transcription Spleen Spleen
43 chr3:49196600-49198800 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr3:49196600-49198800 Weak transcription NHLF lung
45 chr3:49196600-49199200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr3:49196600-49200400 Weak transcription HSMMtube muscle
47 chr3:49196600-49200600 Weak transcription NHDF-Ad bronchial
48 chr3:49196600-49200800 Weak transcription Hela-S3 cervix
49 chr3:49196800-49198800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr3:49196800-49198800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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